Sample-Centric Fusions Results


eg:TCGA.CF.A3MG.01A
Sample can be individually queried by TCGA sample ID here.

Cancer TCGA SampleId FusionPair E-value Tier Frame 5'Gene Junction 3'Gene Junction Details CNV Somatic Muts WGS
SKCM TCGA.DA.A1HW.06A ABCC4__PTPN4 0.18 tier1 In-frame Chr13:95953495/-1 Chr2:120690000/1 ABCC4 PTPN4 ABCC4 PTPN4 validated
SKCM TCGA.DA.A1HW.06A HDAC9__LINGO2 0.51 tier1 CDS-5UTR Chr7:18625145/1 Chr9:28476023/-1 HDAC9 LINGO2 HDAC9 LINGO2 non-validated
SKCM TCGA.DA.A1HW.06A NAALADL2__VPS13C 0.68 tier2 NA Chr3:174158822/1 Chr15:62306191/-1 NAALADL2 VPS13C NAALADL2 VPS13C non-validated
SKCM TCGA.DA.A1HW.06A PDE8A__SLCO3A1 0.73 tier1 Out-of-frame Chr15:85525579/1 Chr15:92638111/1 PDE8A SLCO3A1 PDE8A SLCO3A1 validated
SKCM TCGA.DA.A1HW.06A POC1B__KRT78 100.0 tier3 Out-of-frame Chr12:89918897/-1 Chr12:53233768/-1 POC1B KRT78 POC1B KRT78 non-validated
SKCM TCGA.DA.A1HW.06A PSMA1__SERGEF 1.0 tier2 Out-of-frame Chr11:14632512/-1 Chr11:17981183/-1 PSMA1 SERGEF PSMA1 SERGEF validated
SKCM TCGA.DA.A1HW.06A SEC11A__VPS33B 100.0 tier1 Out-of-frame Chr15:85259256/-1 Chr15:91546361/-1 SEC11A VPS33B SEC11A VPS33B validated
SKCM TCGA.DA.A1HW.06A SERGEF__KCNC1 0.38 tier2 In-frame Chr11:17981017/-1 Chr11:17793212/1 SERGEF KCNC1 SERGEF KCNC1 validated
SKCM TCGA.DA.A1HW.06A TNRC18__HDAC9 0.14 tier1 CDS-5UTR Chr7:5401528/-1 Chr7:18535885/1 TNRC18 HDAC9 TNRC18 HDAC9 non-validated