Sample-Centric Fusions Results


eg:TCGA.CF.A3MG.01A
Sample can be individually queried by TCGA sample ID here.

Cancer TCGA SampleId FusionPair E-value Tier Frame 5'Gene Junction 3'Gene Junction Details CNV Somatic Muts WGS
SKCM TCGA.FS.A1ZK.06A ANKRD11__CPNE7 0.25 tier1 5UTR-CDS Chr16:89556653/-1 Chr16:89657415/1 ANKRD11 CPNE7 ANKRD11 CPNE7 non-validated
SKCM TCGA.FS.A1ZK.06A APPBP2__CA10 0.78 tier1 Out-of-frame Chr17:58577760/-1 Chr17:49711011/-1 APPBP2 CA10 APPBP2 CA10 validated
SKCM TCGA.FS.A1ZK.06A C17orf63__CRLF3 0.01 tier1 5UTR-CDS Chr17:27139227/-1 Chr17:29131126/-1 C17orf63 CRLF3 C17orf63 CRLF3 non-validated
SKCM TCGA.FS.A1ZK.06A CHIC2__SIPA1L3 0.028 tier1 CDS-5UTR Chr4:54915122/-1 Chr19:38519729/1 CHIC2 SIPA1L3 CHIC2 SIPA1L3 non-validated
SKCM TCGA.FS.A1ZK.06A COMMD9__CD59 100.0 tier1 Out-of-frame Chr11:36300027/-1 Chr11:33720060/-1 COMMD9 CD59 COMMD9 CD59 validated
SKCM TCGA.FS.A1ZK.06A DGCR2__GNB1L 0.095 tier1 Out-of-frame Chr22:19052361/-1 Chr22:19776483/-1 DGCR2 GNB1L DGCR2 GNB1L validated
SKCM TCGA.FS.A1ZK.06A GRAP2__BRD1 2.2 tier1 In-frame Chr22:40365537/1 Chr22:50192767/-1 GRAP2 BRD1 GRAP2 BRD1 non-validated
SKCM TCGA.FS.A1ZK.06A PTK2__TRAPPC9 0.79 tier1 5UTR-CDS Chr8:141935760/-1 Chr8:140744445/-1 PTK2 TRAPPC9 PTK2 TRAPPC9 non-validated
SKCM TCGA.FS.A1ZK.06A RBFOX2__MKL1 0.092 tier1 CDS-5UTR Chr22:36142520/-1 Chr22:40859290/-1 RBFOX2 MKL1 RBFOX2 MKL1 validated
SKCM TCGA.FS.A1ZK.06A RNF157__CA10 0.17 tier1 Out-of-frame Chr17:74236234/-1 Chr17:49711011/-1 RNF157 CA10 RNF157 CA10 non-validated
SKCM TCGA.FS.A1ZK.06A SBF1__ODZ4 0.26 tier1 Out-of-frame Chr22:50905767/-1 Chr11:78468066/-1 SBF1 ODZ4 SBF1 ODZ4 non-validated
SKCM TCGA.FS.A1ZK.06A SIPA1L3__CEP89 0.74 tier2 In-frame Chr19:38682950/1 Chr19:33372919/-1 SIPA1L3 CEP89 SIPA1L3 CEP89 validated
SKCM TCGA.FS.A1ZK.06A SLC3A2__GRAP2 4.0 tier4 In-frame Chr11:62653080/1 Chr22:40365415/1 SLC3A2 GRAP2 SLC3A2 GRAP2 validated
SKCM TCGA.FS.A1ZK.06A SMARCD2__NUFIP2 1.1 tier1 Out-of-frame Chr17:61912065/-1 Chr17:27594548/-1 SMARCD2 NUFIP2 SMARCD2 NUFIP2 non-validated
SKCM TCGA.FS.A1ZK.06A TBC1D16__KIF3A 0.078 tier2 NA Chr17:77913821/-1 Chr5:132035266/-1 TBC1D16 KIF3A TBC1D16 KIF3A non-validated
SKCM TCGA.FS.A1ZK.06A TJP2__RPRD2 0.008 tier2 In-frame Chr9:71789348/1 Chr1:150429764/1 TJP2 RPRD2 TJP2 RPRD2 validated
SKCM TCGA.FS.A1ZK.06A ZBED4__RANGAP1 0.23 tier2 5UTR-CDS Chr22:50247637/1 Chr22:41670731/-1 ZBED4 RANGAP1 ZBED4 RANGAP1 non-validated
SKCM TCGA.FS.A1ZK.06A ZNF587__APOM 1.0 tier3 In-frame Chr19:58331313/1 Chr6:31624249/1 ZNF587 APOM ZNF587 APOM non-validated