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Cancer Type-Centric Fusions Results

Cancer Type: Tier:

Tumor type can be selected from twelve tumor types.

Cancer	TCGA SampleId	FusionPair	E-value	Tier	Frame	phosphorylation	ubiquitination	WGS
BLCA	TCGA.BT.A2LA.01A	AARSD1::FBXL20	0.23	tier2	In-frame	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.4Z.AA7R.01A	ABCC4::UGGT2	3.5	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3QH.01A	ABCD3::ARHGAP29	0.063	tier1	Out-of-frame	A1 : B1	A1 : B0	NA
BLCA	TCGA.ZF.AA58.01A	ABHD16A::VARS	4.2	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3QI.01A	ABHD2::BIRC6	1.4	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6U.01A	ABHD8::ILKAP	0.009	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IL.01A	ABL1::DDX27	0.55	tier4	NA	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.K4.A4AC.01A	ABL2::XRRA1	0.71	tier4	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3B4.01A	ABLIM2::PPP2R2C	0.55	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GU.A42P.01A	ABR::RTN4RL1	0.18	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAN5.01A	AC008073.6::UBXN2A	0.29	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.A9R5.01A	AC011498.1::CHAF1A	0.006	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA84.01A	AC024575.1::CCDC159	0.58	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FJ.A3ZE.01A	ACACA::ADAM9	1.5	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.FJ.A3ZE.01A	ACACA::HTRA4	0.79	tier1	In-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.DK.A2I2.01A	ACACA::TADA2A	2.9	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IT.01A	ACOX1::SRP68	2.4	tier1	In-frame	A1 : B1	A0 : B1	NA
BLCA	TCGA.E7.A5KE.01A	ACOX1::SRP68	2.4	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SJ.01A	ACOXL::UNC5D	0.24	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SO.01A	ACTB::CDC5L	1.5	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A3PH.01A	ACTB::KIAA0182	0.51	tier4	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A541.01A	ACTN4::EIF3K	0.18	tier1	In-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.4Z.AA7R.01A	ADAM10::C15orf43	2.8	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.LT.A8JT.01A	ADAM9::MTL5	1.7	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A8HG.01A	ADAM9::UNC5D	0.34	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6P.01A	ADAP1::MAD1L1	0.006	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SR.01A	ADCY2::RPAP2	0.21	tier3	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3N6.01A	ADCY9::TFAP4	0.004	tier1	Out-of-frame	A0 : B1	A0 : B0	non-validated
BLCA	TCGA.BT.A20W.01A	ADIPOR2::DCP1B	0.085	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
BLCA	TCGA.FD.A3B6.01A	ADORA2B::SYN3	0.055	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.C4.A0F7.01A	ADRBK2::AP1B1	0.003	tier1	In-frame	A0 : B0	A0 : B0	validated
BLCA	TCGA.FD.A43P.01A	ADRBK2::RHBDL3	1.7	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.4Z.AA7Q.01A	AFF1::PTPN13	0.83	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA87.01A	AFF1::PTPN13	0.83	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A1AD.01A	AFF1::PTPN13	0.83	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
BLCA	TCGA.E7.A6MD.01A	AFF1::PTPN13	0.83	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3BM.01A	AFF1::PTPN13	0.83	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9T0.01A	AHR::TSPAN13	0.003	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.ZF.AA4T.01A	AKAP13::ADAMTSL3	0.29	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SR.01A	AKT1::ANKS1A	0.25	tier4	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3QH.01A	ALCAM::SH3KBP1	0.019	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SM.01A	ALDOA::ANKS1A	0.55	tier3	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A62S.01A	ALDOA::INTS9	0.24	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6R.01A	ALG14::JAK1	2.2	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A2EF.01A	ALG5::WBSCR17	1.9	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A5KE.01A	AMBRA1::CKAP5	0.39	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A0S7.01A	AMOTL1::SLCO2B1	0.01	tier1	In-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.GV.A40G.01A	ANAPC2::EYS	0.99	tier2	Out-of-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.XF.A9SY.01A	ANKRD11::STARD10	0.65	tier4	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A8HD.01A	ANKRD26::MCM10	1.1	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TG.01A	ANKRD28::GRM7	0.002	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9ST.01A	ANKRD39::FAM178B	1.2	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A8HH.01A	ANKRD46::NCALD	1.5	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A20W.01A	ANKRD46::ODF1	0.12	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IV.01A	ANLN::POU6F2	1.0	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.CF.A8HX.01A	ANO1::CWF19L2	0.56	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.DK.AA75.01A	ANXA4::GKN1	0.75	tier3	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA4T.01A	AP002478.1::TAF3	0.002	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.C4.A0F7.01A	AP1B1::ADRBK2	0.003	tier1	In-frame	A0 : B0	A0 : B0	validated
BLCA	TCGA.BT.A3PH.01A	AP1B1::CLCN3	1.0	tier4	NA	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.FD.A5BT.01A	AP1B1::NIPSNAP1	1.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A6B2.01A	AP2A2::TSPAN4	0.24	tier1	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A40G.01A	AP3D1::DOT1L	0.009	tier2	In-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.4Z.AA84.01A	AP4B1::C1orf88	0.26	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SR.01A	APLP2::EIF2AK2	0.11	tier4	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.KQ.A41O.01A	ARAP1::SLC22A8	1.6	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3B8.01A	ARHGAP10::TMEM184C	0.49	tier4	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3QH.01A	ARHGAP29::MID2	0.62	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6P.01A	ARHGEF10L::PADI4	1.3	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A5RH.01A	ARHGEF2::S100A7	100.0	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SJ.01A	ARHGEF7::KLF10	0.72	tier1	Out-of-frame	A1 : B1	A1 : B0	NA
BLCA	TCGA.FD.A6TI.01A	ARID1B::SMOC2	0.27	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.E7.A7DV.01A	ARID2::SPATS1	0.034	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3B3.01A	ARID4A::C14orf149	0.32	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A3VY.01A	ARID4B::NTPCR	0.11	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3B8.01A	ARIH2::RHOA	0.029	tier4	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMX.01A	ARL13B::EPHA6	1.9	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BL.A0C8.01A	ARL16::CSNK1D	0.3	tier2	Out-of-frame	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.K4.A83P.01A	ARL8B::ITPR1	0.31	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9ST.01A	ARMC8::CACNA2D2	0.27	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.S5.A6DX.01A	ASAP1::ADCY2	0.41	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA87.01A	ASH1L::GON4L	0.27	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A6B1.01A	ASH1L::SPRR2G	0.83	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMY.01A	ASH1L::UBQLN4	1.5	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
BLCA	TCGA.DK.AA6S.01A	ASPH::CHMP1A	0.47	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3QI.01A	ASPH::CLCN3	1.3	tier4	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.YC.A89H.01A	ASPH::TACC1	0.12	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3RB.01A	ATAD5::PTP4A1	0.3	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A2I6.01A	ATAD5::SIPA1L3	0.51	tier2	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GU.A42Q.01A	ATF2::SOS2	0.067	tier1	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.DK.A3IK.01A	ATG2B::SLC22A17	0.29	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9SK.01A	ATG7::FHIT	0.29	tier2	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.AA3D.01A	ATP11A::SPACA7	0.88	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAN4.01A	ATP11B::NET1	0.25	tier1	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.E7.A5KE.01A	ATP5H::HN1	100.0	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3X2.01A	ATP6AP1::ARFGEF2	0.19	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A62P.01A	ATP6AP1::OPN1LW	0.33	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A20U.01A	ATP6V0A1::STAT5A	0.63	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6P.01A	ATP8A2::ALG5	0.003	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A8HD.01A	ATP9A::EPB41L1	0.057	tier4	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.CF.A1HS.01A	ATPAF1::OSBPL9	0.56	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.AA3D.01A	ATXN2::BRAP	0.013	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.AA3B.01A	B3GALNT2::LYST	0.19	tier2	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6P.01A	B3GALTL::ALOX5AP	0.47	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BL.A13J.01A	B3GALTL::C13orf26	0.064	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.BT.A3PK.01A	BACH1::C21orf7	0.12	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A62O.01A	BAG4::WRN	2.9	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.HQ.A2OE.01A	BAZ2A::PRIM1	0.46	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A3WU.01B	BCKDHB::TTK	0.14	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.C4.A0F7.01A	BCL11B::MIPOL1	0.16	tier1	CDS-5UTR	A1 : B0	A1 : B0	non-validated
BLCA	TCGA.DK.A1A3.01A	BCL2L13::ZNF383	0.93	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A43N.01A	BCR::PPIL2	0.98	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMX.01A	BDH1::C7orf60	0.041	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GU.A42Q.01A	BMP7::MACROD2	0.017	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.A9RE.01A	BPTF::TTYH2	1.5	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.K4.A3WV.01A	BRAF::MRPS33	0.26	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.G2.A2EC.01A	BRE::DTNB	2.0	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3QF.01A	C10orf11::NCRNA00245	0.86	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A8HD.01A	C10orf18::AKR1E2	0.48	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.BL.A0C8.01B	C10orf68::CCDC7	0.11	tier1	5UTR-CDS	A0 : B1	A0 : B0	non-validated
BLCA	TCGA.BL.A13I.01B	C10orf68::CCDC7	0.11	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
BLCA	TCGA.BL.A13J.01B	C10orf68::CCDC7	0.11	tier1	5UTR-CDS	A0 : B1	A0 : B0	non-validated
BLCA	TCGA.HQ.A2OE.01A	C12orf73::GLT8D2	1.4	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.AA3B.01A	C14orf102::CATSPERB	0.75	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMW.01A	C14orf93::TIMM9	1.4	tier2	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6W.01A	C15orf44::SLC24A1	1.9	tier2	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A2EF.01A	C17orf42::CADM2	2.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6U.01A	C19orf2::SLC35F1	0.003	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA5H.01A	C19orf42::CACNA1A	3.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SJ.01A	C1orf116::LIN9	0.2	tier4	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6S.01A	C4orf34::PDS5A	0.04	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IT.01A	C6orf132::GUCA1B	0.006	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SS.01A	C6orf170::RSPO3	5.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A85H.01A	C8orf38::INTS8	1.5	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7Q.01A	C8orf76::ATAD2	0.076	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IN.01A	CABIN1::GRIN2A	0.32	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.K4.A5RH.01A	CABYR::OSBPL1A	0.019	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMY.01A	CACNA1I::FBXW5	0.019	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KT.01A	CACNA1I::SYNGR1	0.45	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A40E.01A	CALD1::EXOC4	0.19	tier4	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.CU.A3KJ.01A	CALML3::ANKS1A	0.29	tier4	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMX.01A	CAMSAP1::C9orf86	3.3	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A3VY.01A	CAPN1::SUPT16H	0.51	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA87.01A	CARD11::AC091801.1	0.15	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A5KE.01A	CASC3::SIPA1L3	1.4	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA5H.01A	CBX3::CDK14	0.032	tier1	CDS-3UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.GU.A764.01A	CC2D1A::RRBP1	0.19	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.UY.A9PE.01A	CCDC88C::C14orf159	0.82	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMW.01A	CCDC88C::KIAA0247	0.41	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TC.01A	CCDC9::NUP62	0.072	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A6B2.01A	CCND3::TRERF1	0.19	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A5RH.01A	CCNL2::TYK2	0.5	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A6B2.01A	CCNT1::ADCY6	1.6	tier3	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SP.01A	CCNY::ANK3	0.17	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
BLCA	TCGA.BL.A0C8.01A	CD151::EPS8L2	0.19	tier1	Out-of-frame	A0 : B1	A0 : B0	validated
BLCA	TCGA.4Z.AA7S.01A	CD63::OS9	1.4	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9T5.01A	CD74::CD40	0.008	tier3	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TC.01A	CDC42BPA::WWOX	0.15	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KT.01A	CDC42BPG::EHD1	0.022	tier4	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3RB.01A	CDC5L::TMEM63B	0.22	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A6AV.01A	CDH3::CHKA	0.33	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A5BR.01A	CDK1::NRG1	0.75	tier3	In-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.ZF.AA4T.01A	CDK12::IKZF3	0.067	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA4T.01A	CDK12::PLXDC1	0.15	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.UY.A9PD.01A	CDK12::TAF15	0.18	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA5H.01A	CDK13::DDX56	2.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A2EF.01A	CDK6::HEPACAM2	0.073	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6U.01A	CDKAL1::DNAH8	0.48	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.A9RF.01A	CDKAL1::LIG1	0.14	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3JZ.01A	CDKAL1::RCAN2	1.4	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAN7.01A	CDKAL1::RP1-139D8.6	0.77	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3JZ.01A	CDKAL1::TBC1D1	0.66	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.E7.A6MD.01A	CDKN2A::CAPZB	100.0	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMW.01A	CDKN2A::EXD2	1.8	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3RD.01A	CDKN2A::MGA	1.8	tier2	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KW.01A	CDS1::UGT1A10	0.11	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KW.01A	CDS1::UGT1A6	0.11	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A43N.01A	CDS2::C20orf61	2.2	tier1	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A1A3.01A	CEBPG::TDRD12	0.042	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.C4.A0F7.01A	CEP128::TSHR	0.22	tier4	Out-of-frame	A0 : B1	A0 : B0	validated
BLCA	TCGA.4Z.AA84.01A	CEP170::UBE2Q1	0.78	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A85H.01A	CEP350::TOR1AIP1	0.003	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.UY.A9PE.01A	CEP350::TOR1AIP1	0.003	tier3	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A5BS.01A	CERS2::SETDB1	1.4	tier3	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.UY.A9PE.01A	CERS6::PSMD14	0.48	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9T0.01A	CFDP1::WWOX	100.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A3VY.01A	CHRAC1::SNTG1	0.025	tier3	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A5RH.01A	CHTOP::S100A13	0.026	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.CF.A1HR.01A	CIDEB::ADCY4	0.038	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA87.01A	CIRBP::CNN2	0.92	tier1	5UTR-CDS	A0 : B1	A0 : B1	NA
BLCA	TCGA.PQ.A6FI.01A	CLCN3::TDO2	1.4	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA51.01A	CLIP1::ZCCHC8	0.92	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.AA3D.01A	CLMN::WDR20	0.69	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3QH.01A	CLOCK::UGT2A3	0.6	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SJ.01A	CMIP::BCMO1	0.41	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9SK.01A	CMTM7::CMTM8	1.0	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3B5.01A	CNBD1::PTPN2	0.45	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A85H.01A	CNOT1::GOT2	0.72	tier1	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.XF.A9SH.01A	CNOT2::ZDHHC17	0.89	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TA.01A	COBLL1::SCN3A	0.88	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA5H.01A	COG5::FOXP1	0.39	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A1A5.01A	COIL::CA4	0.37	tier1	Out-of-frame	A1 : B0	A0 : B0	non-validated
BLCA	TCGA.FD.A3SL.01A	COL4A2::ELK3	0.94	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.GD.A3OS.01A	COL5A1::PTGES2	0.2	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GD.A3OS.01A	COL6A2::DDX27	4.0	tier3	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KT.01A	COMMD10::AP3S1	1.1	tier4	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3QI.01A	COMMD10::AP3S1	1.1	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A6B6.01A	COPS2::CTTN	1.7	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMX.01A	CPD::PDE4D	0.22	tier1	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.UY.A9PB.01A	CREBBP::ADCY9	0.07	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.GU.A42R.01A	CREBBP::CASKIN1	0.052	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A6AV.01A	CREBL2::GPR19	0.81	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9SP.01A	CRISPLD1::LY96	0.32	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A1A6.01A	CSPP1::LRRC67	0.058	tier1	Out-of-frame	A1 : B0	A0 : B0	non-validated
BLCA	TCGA.BT.A0YX.01A	CTC-203F4.1::JUP	0.31	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A40G.01A	CTD-2192J16.17::COL5A3	3.5	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3X2.01A	CTDSPL::WRN	0.25	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA84.01A	CTNNA1::LARP1	0.26	tier2	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SO.01A	CTNND1::ZNFX1	0.49	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A8O8.01A	CTSW::FIBP	0.72	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3JV.01A	CTTN::DDX27	0.31	tier2	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.UY.A9PH.01A	CTTN::SHANK2	0.3	tier1	In-frame	A1 : B1	A0 : B0	NA
BLCA	TCGA.GD.A3OS.01A	CYFIP1::TUBGCP5	0.077	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9SY.01A	DAP3::TIPRL	0.12	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMX.01A	DCAF6::BCAS3	1.5	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA5P.01A	DCAF8::FCRLA	0.34	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A4ZW.01A	DCUN1D3::TMEM159	2.6	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A40E.01A	DEK::KIF25	100.0	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.UY.A78K.01A	DGCR8::COMT	0.032	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A3PJ.01A	DGUOK::ACTG2	1.0	tier1	In-frame	A0 : B1	A0 : B1	validated
BLCA	TCGA.DK.A2I1.01A	DGUOK::STAMBP	0.006	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3RC.01A	DHRS12::RASL11A	0.37	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A85H.01A	DHRS2::IL25	0.28	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3B3.01A	DHRS4::SCFD1	0.38	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.UY.A9PD.01A	DHX8::FMO5	1.4	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.K4.A6MB.01A	DIEXF::TRAF3IP3	3.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A5C0.01A	DIP2A::C16orf46	0.48	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.BL.A0C8.01A	DIP2B::SPATS2	0.29	tier1	Out-of-frame	A0 : B0	A0 : B0	validated
BLCA	TCGA.DK.A2I1.01A	DIRAS2::GNA14	0.11	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A83P.01A	DIS3L2::ARMC9	0.026	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TG.01A	DLG1::MYO9B	0.39	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.G2.AA3F.01A	DMXL1::ARHGAP15	0.096	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3X2.01A	DNAJC11::KRT13	0.7	tier4	3UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA51.01A	DNM2::ARHGAP25	0.004	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMJ.01A	DNM2::RFX2	0.068	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.KQ.A41P.01A	DNMBP::KIAA0494	4.7	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FJ.A3ZE.01A	DNMT1::EMR1	0.17	tier3	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.K4.A3WS.01A	DNMT3B::DUSP15	0.076	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.UY.A9PE.01A	DOCK1::RBFOX2	5.9	tier2	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.E7.A85H.01A	DPP3::SPATA6	0.045	tier2	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SR.01A	DPYSL3::ANKS1A	0.1	tier3	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3RD.01A	DRAM1::NUP107	0.46	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A3WU.01B	DUSP16::GPR19	0.018	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.C4.A0F0.01A	DYNC2H1::C11orf70	0.31	tier1	Out-of-frame	A1 : B1	A1 : B0	NA
BLCA	TCGA.GU.A764.01A	E2F3::MYL4	100.0	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A1AD.01A	EEA1::CRADD	0.14	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.CF.A27C.01A	EEF2::CLCN3	2.6	tier3	NA	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.G2.A3VY.01A	EEF2::EIF2AK2	3.9	tier3	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TG.01A	EEFSEC::NSMCE2	1.1	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.HQ.A5ND.01A	EFHD2::CXCR5	0.39	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.AA3B.01A	EFNA5::MCC	0.45	tier2	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.GC.A6I3.01A	EGFR::GRB10	0.55	tier1	In-frame	A1 : B1	A0 : B0	NA
BLCA	TCGA.GV.A40E.01A	EHBP1::COMMD1	2.0	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.H4.A2HO.01A	EHMT1::LRRC68	0.013	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3NA.01A	EIF2AK2::CEBPZ	0.36	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA80.01A	ELF1::KIAA0564	0.91	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6P.01A	ELF1::UBL3	0.004	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A85H.01A	EML1::SPATA7	1.3	tier2	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.CU.A5W6.01A	ENAH::UCHL5	0.14	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA84.01A	EP300::HAUS8	1.7	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.BT.A0S7.01A	EP300::MCHR1	0.023	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9SZ.01A	EP400::TMPRSS12	0.035	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KP.01A	EPB41::HGSNAT	1.1	tier1	In-frame	A1 : B1	A0 : B0	NA
BLCA	TCGA.GV.A3JZ.01A	EPB41::PIGV	0.57	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A8HD.01A	EPB41L1::ATP9A	0.057	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.HQ.A2OE.01A	EPHX2::PTK2B	0.53	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A20Q.01A	EPN2::KCNJ12	0.035	tier1	5UTR-5UTR	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.K4.A4AC.01A	EPN2::MAP2K3	1.4	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
BLCA	TCGA.UY.A78N.01A	EPS15::CCDC18	0.074	tier1	In-frame	A1 : B1	A0 : B0	NA
BLCA	TCGA.DK.A3IQ.01A	EPS8::PIK3C2G	0.2	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A1A3.01A	ERBB2::PPP1R1B	3.8	tier4	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.GC.A4ZW.01A	ERBB2IP::MYOM2	5.4	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
BLCA	TCGA.DK.AA6P.01A	ERCC2::NOVA2	0.06	tier1	In-frame	A0 : B0	A1 : B0	NA
BLCA	TCGA.DK.A1A3.01A	ERRFI1::LUZP1	0.28	tier2	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.AA3B.01A	ESCO1::CPNE1	4.6	tier1	5UTR-CDS	A0 : B0	A0 : B1	NA
BLCA	TCGA.SY.A9G5.01A	EXOC2::OOEP	100.0	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A1A5.01A	EXOC6B::HNRPLL	0.88	tier2	Out-of-frame	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.BT.A3PK.01A	EXT1::FAM155A	0.17	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A2EO.01A	EXT1::WDYHV1	0.13	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.UY.A78N.01A	FAF1::CHIA	0.88	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KP.01A	FAF1::EPS15	0.81	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA84.01A	FAF1::ITGB3BP	2.0	tier1	In-frame	A0 : B1	A1 : B0	NA
BLCA	TCGA.BL.A13J.01A	FAM102B::SLC25A24	0.056	tier2	In-frame	A1 : B0	A0 : B0	non-validated
BLCA	TCGA.BT.A2LA.01A	FAM13C::ZNF365	0.51	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.ZF.A9RL.01A	FAM164A::ANGPT1	0.057	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A20W.01A	FAM169A::ANKRD31	1.3	tier3	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3QF.01A	FAM169A::ANKRD31	1.3	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KO.01A	FAM179B::KCNK13	0.57	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMW.01A	FAM179B::STYX	1.1	tier2	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A43P.01A	FAM189A1::GABRG3	0.096	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.LT.A5Z6.01A	FAM190A::BMP2K	0.41	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.FD.A3SJ.01A	FAM190A::MMRN1	1.1	tier4	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.H4.A2HO.01A	FAM190A::MMRN1	1.1	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
BLCA	TCGA.G2.A3VY.01A	FAM204A::AP1G2	0.7	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9SK.01A	FAM38A::PMFBP1	0.32	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IM.01A	FAM49B::AK5	0.31	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A7DV.01A	FAM49B::MRPL13	100.0	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.S5.A6DX.01A	FAM53A::C1orf201	0.28	tier3	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.UY.A78K.01A	FAM73B::NUP188	0.22	tier4	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA84.01A	FAM91A1::ANXA13	0.089	tier1	In-frame	A1 : B1	A0 : B0	NA
BLCA	TCGA.DK.AA6S.01A	FANCI::ABHD2	0.42	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.KQ.A41Q.01A	FAR2::AGMO	0.64	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GU.A764.01A	FARSA::NARS2	0.58	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A6B2.01A	FBLN1::SMC1B	1.5	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.UY.A9PE.01A	FBXL2::KIF9	5.6	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A62S.01A	FBXL20::KRT27	2.1	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA58.01A	FBXO17::OSBPL6	0.56	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9SH.01A	FBXO21::CHPT1	1.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E5.A4TZ.01A	FBXO31::ZNRF1	0.044	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A6MB.01A	FBXO42::SPATA21	0.003	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A2HX.01A	FBXW7::ARHGAP10	0.038	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A42C.01A	FCHSD2::PPFIA1	0.84	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9ST.01A	FDFT1::GATA4	0.92	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A2LA.01A	FECH::C1orf130	1.9	tier1	CDS-5UTR	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.CF.A3MF.01A	FGFR3::TACC3	0.12	tier1	In-frame	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.CF.A3MG.01A	FGFR3::TACC3	0.12	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.CF.A3MH.01A	FGFR3::TACC3	0.12	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.CF.A47S.01A	FGFR3::TACC3	0.12	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.CF.A47T.01A	FGFR3::TACC3	0.12	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.CF.A8HY.01A	FGFR3::TACC3	0.12	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A5KE.01A	FGFR3::TACC3	0.12	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMX.01A	FGFR3::TACC3	0.12	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMZ.01A	FGFR3::TACC3	0.12	tier4	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.KQ.A41S.01A	FKBP5::BYSL	1.9	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.AA3B.01A	FLNB::RHBDF1	0.29	tier1	CDS-5UTR	A1 : B0	A1 : B0	NA
BLCA	TCGA.4Z.AA7Q.01A	FLNB::SLMAP	0.66	tier3	Out-of-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.BT.A20O.01A	FN1::ZNFX1	0.67	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A5BT.01A	FNDC3B::EMP3	0.8	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.FJ.A3ZF.01A	FNIP1::IL5	0.19	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7Q.01A	FOXJ3::CCDC23	1.5	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMX.01A	FOXK2::C17orf101	3.0	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.BL.A0C8.01A	FREM1::SLAMF7	0.079	tier2	Out-of-frame	A1 : B0	A0 : B0	validated
BLCA	TCGA.XF.AAMX.01A	FREM1::UNC13B	0.19	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.CF.A1HS.01A	FRMD6::RTN4	0.019	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.A9RC.01A	FRS2::BEST3	0.02	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3RD.01A	FRS2::DRAM1	0.86	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.S5.A6DX.01A	FRS2::LACRT	1.6	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3RD.01A	FRS2::NUP107	0.26	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TG.01A	FRS2::SCAF11	0.031	tier3	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A85H.01A	FRYL::NKAIN3	0.83	tier4	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A6B5.01A	FSCN1::EIF2AK1	0.44	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A3WU.01B	FSTL4::SLC22A4	5.2	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3X2.01A	FXYD3::TARM1	100.0	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GD.A3OP.01A	FXYD3::ZNFX1	1.3	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.LC.A66R.01A	FZD6::DPYS	1.0	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6W.01A	GABPB1::TRPM7	1.1	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.CU.A5W6.01A	GAK::LUC7L3	3.9	tier1	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TE.01A	GAK::SPON2	0.29	tier1	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A40E.01A	GALNTL4::BECN1	2.7	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IN.01A	GALNTL4::IER3IP1	1.6	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA84.01A	GANC::RORA	0.003	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A4ZW.01A	GAS2L1::SMTN	0.17	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TB.01A	GAS2L3::MED13L	0.93	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.BT.A20T.01A	GATAD2B::ERI3	0.14	tier3	5UTR-CDS	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.2F.A9KP.01A	GBF1::UBE2R2	3.2	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.FD.A3B3.01A	GDI2::ZNF526	1.2	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3RD.01A	GDPD1::SMG8	4.6	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GD.A2C5.01A	GGNBP2::ZMAT4	0.86	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.G2.A2EL.01A	GIGYF2::HEATR7B1	0.01	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.E7.A541.01A	GINS2::C16orf74	1.0	tier4	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A3WV.01A	GMDS::MRPS18B	1.2	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A6B2.01A	GMEB1::TRNAU1AP	0.033	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A40E.01A	GNA12::AMACR	2.3	tier3	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SL.01A	GNAS::SUPT16H	0.62	tier1	3UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.PQ.A6FN.01A	GNPAT::CAPN9	0.81	tier2	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.HQ.A2OE.01A	GNPAT::TRIM67	0.88	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9T3.01A	GOLGA3::RTN2	0.018	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.AA3F.01A	GOLGA4::RRM1	0.07	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9T3.01A	GON4L::ARHGEF2	0.35	tier3	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.HQ.A2OF.01A	GPATCH8::STAC2	0.23	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
BLCA	TCGA.H4.A2HO.01A	GPD1L::STT3B	0.18	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3JZ.01A	GPR110::MEP1A	0.046	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6S.01A	GPR110::TNFRSF21	2.4	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6U.01A	GPR110::TNFRSF21	2.4	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A62P.01A	GPR110::TNFRSF21	2.4	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.CU.A0YN.01A	GRB10::STEAP1B	0.29	tier2	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9SK.01A	GRB7::CD300E	3.4	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GU.AATP.01A	GRB7::ERBB2	0.031	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.CU.A0YR.01A	GRB7::PLXDC1	0.041	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BL.A0C8.01A	GRHL2::FAM49A	0.021	tier1	CDS-5UTR	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.K4.A6MB.01A	GRID1::GLUD1	0.63	tier1	In-frame	A0 : B1	A0 : B1	NA
BLCA	TCGA.FD.A3SS.01A	GRN::CDKN3	0.087	tier3	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A3VY.01A	GRN::FAR1	1.7	tier1	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.S5.A6DX.01A	GRN::ZC3H3	0.27	tier1	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SM.01A	GSN::HSPA8	0.92	tier3	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KT.01A	GSTP1::ELP4	100.0	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A1AD.01A	GTF2F2::S100A3	100.0	tier1	CDS-5UTR	A1 : B0	A1 : B0	NA
BLCA	TCGA.DK.A1AD.01A	GTF2F2::S100A4	0.36	tier1	CDS-5UTR	A1 : B0	A1 : B0	NA
BLCA	TCGA.2F.A9KO.01A	GUCY1A2::NLK	0.84	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A4ZW.01A	GULP1::BOLL	0.24	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.AA3D.01A	H6PD::CA6	0.01	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A3X6.01A	HADHA::DNAJC27	0.15	tier2	Out-of-frame	A0 : B0	A1 : B0	NA
BLCA	TCGA.XF.AAMZ.01A	HAUS8::CARS	1.7	tier4	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3RD.01A	HDAC1::PEPD	0.53	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BL.A13J.01A	HDAC4::SATB2	0.57	tier2	In-frame	A1 : B1	A0 : B0	non-validated
BLCA	TCGA.DK.A1A7.01A	HDDC2::TPD52L1	0.13	tier1	In-frame	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.FD.A3B6.01A	HEATR2::ZNRF3	0.83	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A2LA.01A	HELZ::ABCA10	0.021	tier4	5UTR-5UTR	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.CU.A3KJ.01A	HELZ::CEP112	0.5	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.E7.A4IJ.01A	HERC1::C15orf44	0.12	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3X2.01A	HERC1::DAPK2	0.12	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SJ.01A	HERC4::CDKAL1	0.15	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.UY.A8OC.01A	HGSNAT::FUT10	0.21	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3YS.01A	HIPK2::TMEM130	0.6	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6P.01A	HIVEP2::AHI1	0.048	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A3PK.01A	HIVEP3::ZMYND12	0.064	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3WC.01A	HLA-B::EIF2AK2	0.55	tier4	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A6B2.01A	HLA-C::EIF2AK2	7.1	tier3	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A62P.01A	HMGCS1::UNC13A	1.3	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A3WU.01B	HMGXB3::PPARGC1B	0.013	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMW.01A	HNRNPC::PAPOLA	0.06	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMT.01A	HNRNPUL1::CNN1	0.006	tier1	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.K4.A6MB.01A	HOOK3::BAALC	0.025	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.K4.A3WU.01B	HPGD::GUCY1A3	0.039	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.BL.A0C8.01B	HPRT1::LRRC2	0.25	tier2	CDS-5UTR	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.E7.A7DV.01A	HRH1::TSEN2	0.45	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A2LD.01A	HS6ST2::NPFFR2	1.1	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.CU.A3QU.01A	HTT::GRK4	0.3	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9SM.01A	HUWE1::BICD1	0.031	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.C4.A0F7.01A	ICA1::HGF	0.043	tier1	5UTR-CDS	A0 : B0	A0 : B0	validated
BLCA	TCGA.GV.A3QF.01A	IFFO2::UBR4	1.0	tier1	Out-of-frame	A0 : B1	A0 : B1	NA
BLCA	TCGA.ZF.A9RL.01A	IFT52::MXRA8	0.57	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SR.01A	IKBKB::UNC5D	0.95	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA4T.01A	IKZF3::SRCIN1	0.7	tier1	In-frame	A1 : B1	A1 : B0	NA
BLCA	TCGA.E7.A4IJ.01A	IL22RA1::C1orf201	0.97	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7M.01A	IL4I1::VSTM2B	100.0	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.GU.A42P.01A	IL4R::NSMCE1	1.6	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9SI.01A	ILF3::ATG4D	0.42	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SR.01A	INPP4A::MGAT4A	0.58	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.CU.A3KJ.01A	INPP5A::C10orf93	0.26	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KP.01A	IP6K1::MON1A	0.4	tier1	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.GV.A3JV.01A	IQSEC1::WNT7A	1.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3RD.01A	IRAK1::MECP2	0.009	tier4	Out-of-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.BT.A20V.01A	ITCH::AHCY	1.9	tier1	In-frame	A1 : B1	A1 : B1	non-validated
BLCA	TCGA.UY.A78N.01A	ITCH::ARFGAP1	0.065	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.CU.A3KJ.01A	ITGAX::PHKG2	0.032	tier3	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A20W.01A	ITGB6::RBMS1	0.71	tier3	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.DK.A2I6.01A	ITGB6::RBMS1	0.71	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.A9R1.01A	ITGB6::RBMS1	0.71	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA51.01A	ITGB6::RBMS1	0.71	tier2	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.KQ.A41R.01A	JARID2::CDKAL1	0.67	tier1	Out-of-frame	A1 : B1	A0 : B1	NA
BLCA	TCGA.DK.AA76.01A	JARID2::HIVEP1	0.15	tier2	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A3WV.01A	JARID2::PPP1R10	0.076	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TG.01A	JARID2::SGCZ	1.6	tier4	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.ZF.A9RD.01A	JUP::ACLY	6.6	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IQ.01A	KANK1::NFX1	0.093	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3NA.01A	KAT2A::STAT5B	0.013	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A6MB.01A	KAT6A::VPS13B	0.11	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.KQ.A41N.01A	KAT6B::ADK	0.61	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6T.01A	KCNQ5::CRYL1	1.3	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3WY.01A	KCTD20::ETV7	0.43	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.A9RD.01A	KDM4A::PTPRF	1.2	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A20Q.01A	KDM6A::KAL1	0.38	tier1	Out-of-frame	A0 : B0	A0 : B0	validated
BLCA	TCGA.GC.A4ZW.01A	KIAA0430::EEF2K	0.42	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A2LB.01A	KIAA0430::IQCK	0.21	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BL.A0C8.01A	KIAA0889::RPS6KA5	0.051	tier2	Out-of-frame	A0 : B1	A0 : B0	non-validated
BLCA	TCGA.XF.A9T0.01A	KIAA0907::ARHGEF2	0.2	tier1	In-frame	A0 : B1	A0 : B1	NA
BLCA	TCGA.DK.A2I1.01A	KIAA1217::SPAG6	0.22	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IQ.01A	KIAA1267::NSF	2.6	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A2EL.01A	KIAA1328::DCC	1.7	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A2LD.01A	KIAA1429::CPA6	0.12	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A1A7.01A	KIAA1598::PRDX3	0.22	tier1	In-frame	A0 : B0	A0 : B0	validated
BLCA	TCGA.HQ.A2OE.01A	KIAA1731::WDR90	0.13	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.CF.A7I0.01A	KIAA1737::C14orf166B	0.91	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3JW.01A	KIDINS220::EYS	0.066	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA80.01A	KIF13A::KDM1B	0.32	tier1	In-frame	A1 : B1	A0 : B0	NA
BLCA	TCGA.2F.A9KW.01A	KIF13B::PPP2R5B	0.86	tier1	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.A9R3.01A	KIF1B::NF1	0.032	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA53.01A	KIF26B::SMYD3	1.4	tier4	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.G2.AA3D.01A	KLC3::CLPTM1	0.046	tier1	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.E7.A5KF.01A	KLF5::SUPT16H	0.59	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA82.01A	KLHDC4::SLC7A5	0.007	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A3IE.01A	KLHDC5::MRPS35	0.45	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IQ.01A	KLHL18::HEMK1	0.29	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3X2.01A	KLHL5::LNX1	0.024	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.E5.A2PC.01A	KPNA3::FGF2	1.1	tier1	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.UY.A8OB.01A	KPNA3::MLNR	0.77	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.GU.A767.01A	KPNA3::SPRYD7	0.49	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TF.01A	KPNA4::PTPRD	0.27	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3YS.01A	KRBA2::YBX2	1.7	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.BL.A13J.01A	KRBOX1::C3orf39	0.81	tier1	5UTR-5UTR	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.DK.A3WX.01A	KRT14::SUPT16H	0.96	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A3PH.01A	KTN1::ANKS1A	3.7	tier3	NA	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.DK.A1A7.01A	KTN1::DRGX	1.9	tier3	5UTR-CDS	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.GC.A3RB.01A	L3MBTL3::WDR37	0.74	tier2	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A2EF.01A	LAP3::DDX1	0.22	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.E7.A4IJ.01A	LARGE::EIF4ENIF1	0.17	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMJ.01A	LARGE::KCNJ4	0.027	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAN2.01A	LARGE::SLC5A4	1.1	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9SP.01A	LARP1B::C4orf29	0.95	tier3	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA76.01A	LCOR::MAP2K6	0.016	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A7DV.01A	LCORL::CDKAL1	0.58	tier2	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAN7.01A	LDLRAD3::PAMR1	1.5	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9SZ.01A	LDLRAP1::TMEM57	0.12	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.UY.A9PH.01A	LETMD1::LARP4	0.49	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6P.01A	LGALS8::EDARADD	0.055	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3B4.01A	LGALS8::RHBG	0.46	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA4U.01A	LGR5::CNOT2	0.018	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA4U.01A	LGR5::PTPRR	0.004	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
BLCA	TCGA.CF.A3MI.01A	LIMA1::TAOK3	0.05	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.CU.A5W6.01A	LIMCH1::CWH43	0.64	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KW.01A	LIMCH1::UCHL1	0.3	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IN.01A	LIMK2::CDC45	3.3	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A62N.01A	LIPA::TMEM132A	1.4	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA4T.01A	LIPG::UCMA	1.5	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A5KE.01A	LLGL2::EXOC7	0.049	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.CU.A0YN.01A	LMBR1L::KCNK6	2.7	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GD.A2C5.01A	LRBA::RXFP1	0.41	tier2	Out-of-frame	A0 : B0	A0 : B0	validated
BLCA	TCGA.E7.A97Q.01A	LRBA::SH3D19	1.9	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3B7.01A	LRBA::SH3D19	1.9	tier3	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA80.01A	LRCH1::PHF11	100.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAML.01A	LRP5::RBFOX1	2.6	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.K4.A3WV.01A	LRRC16A::CTSW	0.9	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A85H.01A	LRSAM1::GARNL3	0.13	tier4	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.DK.A3IK.01A	LTBP1::PLB1	0.008	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.K4.A83P.01A	LUC7L::CORIN	0.03	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA87.01A	LUC7L::SLC27A5	0.61	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.CU.A0YO.01A	LUZP1::NEDD4L	0.018	tier3	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A20W.01A	MACROD1::NRXN2	0.98	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A43N.01A	MADD::PIK3C2A	0.51	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA5P.01A	MAN1A1::IFNGR2	0.032	tier3	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6P.01A	MAN1C1::TMEM50A	0.13	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA84.01A	MAN2A1::HSPA4	2.8	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.A9R9.01A	MAN2B1::RTBDN	0.82	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IS.01A	MAN2B2::TACC3	0.22	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7Q.01A	MAN2C1::PTPN9	0.46	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.LC.A66R.01A	MANBAL::UBR5	2.4	tier2	In-frame	A0 : B1	A0 : B1	NA
BLCA	TCGA.K4.A83P.01A	MAP2K5::C15orf61	1.3	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.UY.A78K.01A	MAP3K1::OR4N2	2.8	tier1	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IK.01A	MAP3K5::PERP	0.37	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7Q.01A	MAP4::NME6	0.18	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7Q.01A	MAP4::SPINK8	1.7	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMW.01A	MAP4K5::ADCK1	1.2	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SN.01A	MAPKAP1::AP1G2	1.4	tier3	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMX.01A	MAPKBP1::VPS39	0.36	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.YC.A89H.01A	MAPRE1::UQCC	0.34	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.BT.A20X.01A	MARCH9::KCNC2	0.6	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA51.01A	MARK2::C11orf84	0.097	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMW.01A	MARK3::BAG5	2.2	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IM.01A	MARS::NOP2	0.31	tier1	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.XF.AAMT.01A	MAST4::ST8SIA4	1.4	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMQ.01A	MATN2::SFMBT1	0.65	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.GU.A767.01A	MBNL2::PLAC8	0.37	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.HQ.A2OF.01A	MBTD1::SRCIN1	1.4	tier1	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.DK.A2I4.01A	MCF2L::STK24	0.29	tier4	Out-of-frame	A1 : B1	A0 : B0	NA
BLCA	TCGA.4Z.AA7R.01A	MCM3::GPR110	0.18	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA82.01A	MED13L::TAOK3	0.035	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
BLCA	TCGA.ZF.A9RM.01A	MED13L::WSCD2	1.6	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.PQ.A6FN.01A	MED15::C22orf25	0.022	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IK.01A	MED15::GNB1L	0.005	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.GV.A40E.01A	MED24::KRT40	0.25	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7M.01A	MELK::CNTFR	0.6	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A3IE.01A	METTL3::SALL2	0.35	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.DK.A3X2.01A	MFI2::IGSF11	0.5	tier3	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3RD.01A	MGA::CDKN2A	1.8	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.UY.A78K.01A	MGAT4A::C2orf55	1.2	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.GV.A40E.01A	MGAT5B::CYP11A1	0.025	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FJ.A3ZE.01A	MIB1::CABYR	0.15	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BL.A0C8.01A	MIER2::CDK5RAP1	0.061	tier1	In-frame	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.XF.AAMX.01A	MIPOL1::KIAA0391	0.055	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3YS.01A	MIPOL1::NLGN1	0.61	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TK.01A	MIRLET7BHG::HKDC1	0.6	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.CU.A3QU.01A	MKL2::FRMD4A	0.6	tier2	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A6B2.01A	MKRN1::DENND2A	0.041	tier1	Out-of-frame	A0 : B0	A1 : B0	NA
BLCA	TCGA.UY.A78K.01A	MKRN2::PPARG	0.2	tier1	CDS-5UTR	A0 : B0	A1 : B0	NA
BLCA	TCGA.XF.AAML.01A	MKRN2::PPARG	0.2	tier1	CDS-5UTR	A0 : B0	A1 : B0	NA
BLCA	TCGA.4Z.AA7Q.01A	MLF1::RSRC1	0.66	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A2LA.01A	MLL::SLC22A10	0.11	tier2	CDS-3UTR	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.GC.A3RB.01A	MMP15::CDH5	0.015	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A3WV.01A	MORC3::DOPEY2	4.1	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3JW.01A	MPDU1::C22orf13	0.23	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A20W.01A	MPP5::GPHN	0.24	tier4	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3N6.01A	MPP5::GPHN	0.24	tier1	Out-of-frame	A0 : B0	A0 : B0	validated
BLCA	TCGA.K4.A5RH.01A	MPRIP::TOM1L2	0.42	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.CF.A7I0.01A	MRPL42::POLR3B	0.14	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BL.A0C8.01A	MRPS23::TRIM37	0.5	tier1	Out-of-frame	A0 : B0	A0 : B0	validated
BLCA	TCGA.DK.A6B1.01A	MRS2::DCDC2	1.9	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KR.01A	MSI2::BCAS3	0.27	tier1	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.DK.AA76.01A	MSI2::BRD7	0.17	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA87.01A	MSI2::YPEL2	0.4	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7R.01A	MSL2::STAG1	0.29	tier1	CDS-5UTR	A1 : B0	A1 : B0	NA
BLCA	TCGA.FJ.A871.01A	MTAP::LINGO2	0.19	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMW.01A	MTHFD1::PAPLN	0.73	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.DK.A2I6.01A	MTSS1::ERBB2	0.85	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SL.01A	MXRA8::DDX27	0.86	tier3	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.UY.A78N.01A	MYCBP2::CPB2	0.075	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SM.01A	MYL6::ZNFX1	0.38	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMZ.01A	MYO10::PFDN2	0.67	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IK.01A	MYO18A::RNF135	0.16	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A2ES.01A	MYO1B::GLS	3.1	tier3	3UTR-CDS	A0 : B1	A0 : B0	NA
BLCA	TCGA.GV.A3JZ.01A	MYO5B::CCDC11	2.2	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA4T.01A	MYO5B::DCC	0.27	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.BT.A3PJ.01A	MYO9A::CELF6	1.5	tier1	5UTR-CDS	A0 : B0	A0 : B0	validated
BLCA	TCGA.CU.A3YL.01A	NAA35::LAMC3	0.58	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A85H.01A	NBN::RIPK2	0.43	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.CF.A8HY.01A	NCAPD3::KBTBD3	0.68	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7Q.01A	NCK1::PCCB	0.043	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A6ZA.01A	NCOA2::FAM150A	0.03	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IS.01A	NCOA3::DUSP15	1.7	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A6B2.01A	NCOA4::MSMB	0.87	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.AA3D.01A	NDC80::PPP4R1	1.1	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SR.01A	NDRG1::SNW1	0.083	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A8HD.01A	NEBL::CAMK1D	2.7	tier1	In-frame	A1 : B1	A0 : B0	NA
BLCA	TCGA.GC.A3RB.01A	NEBL::PRL	0.01	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.BT.A20W.01A	NECAP1::ANK1	2.7	tier1	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.GD.A2C5.01A	NEDD4::GABRA5	0.84	tier1	CDS-5UTR	A1 : B0	A0 : B0	non-validated
BLCA	TCGA.BT.A20R.01A	NEDD4L::HYI	0.65	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.GC.A4ZW.01A	NEIL2::TTC7B	1.2	tier2	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.KQ.A41P.01A	NEIL3::AGA	2.2	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A1AF.01A	NEK4::SETD2	1.1	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A3WU.01B	NEK7::CADM3	0.55	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6X.01A	NF1::SPACA3	0.11	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3YS.01A	NFAT5::CHST4	0.09	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA5P.01A	NFE2L2::AGPS	0.065	tier1	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A5KE.01A	NFIC::CELF5	0.43	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A4IJ.01A	NFIX::CRYBB3	0.014	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.GV.A40E.01A	NHSL1::SLCO2B1	1.2	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMY.01A	NIPAL3::PPP4R1	0.22	tier2	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA4V.01A	NIPBL::MRPS30	0.004	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FJ.A3Z7.01A	NIPBL::SPEF2	0.64	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SN.01A	NISCH::PBRM1	1.4	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.A9RM.01A	NLK::SMURF2	0.16	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9SV.01A	NOC2L::TCEB3	0.51	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A541.01A	NOS1AP::AHI1	1.2	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IK.01A	NOS1AP::LRRC52	0.27	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.LT.A5Z6.01A	NOVA1::FAM190A	0.23	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3QI.01A	NPRL3::KIFC2	0.11	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A3VY.01A	NPRL3::LUC7L	0.22	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9SY.01A	NR6A1::DEAF1	2.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.CF.A3MI.01A	NRG1::KRT78	0.081	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.BT.A20T.01A	NSD1::FAT2	0.55	tier2	In-frame	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.HQ.A2OE.01A	NSRP1::EFCAB5	0.46	tier3	In-frame	A1 : B1	A0 : B0	NA
BLCA	TCGA.2F.A9KO.01A	NUDT2::UBAP1	0.38	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A2I2.01A	NUFIP2::ZNF643	0.92	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.YF.AA3L.01A	NUMB::TTLL5	3.0	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6P.01A	NUP107::CPM	0.071	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A3VY.01A	NUP133::CDH6	1.3	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.PQ.A6FI.01A	NUP153::DTNBP1	0.11	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E5.A2PC.01A	NUP155::TRIO	0.022	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KP.01A	NUP188::TMEM8C	0.047	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7M.01A	NUP62::VSTM2B	0.15	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3X2.01A	NUP85::KCTD2	1.1	tier1	In-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.CF.A1HR.01A	NUP85::ZDHHC18	0.9	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.KQ.A41N.01A	NUP88::NLRP1	0.14	tier3	In-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.FD.A43N.01A	NUP98::DNHD1	0.025	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.BL.A0C8.01A	NVL::LARS2	0.53	tier2	In-frame	A1 : B0	A0 : B0	validated
BLCA	TCGA.GU.A42Q.01A	OBFC1::PCGF3	0.29	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3B8.01A	OCIAD2::NFXL1	0.55	tier3	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KP.01A	OCLN::CCNB1	0.5	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A62S.01A	ODZ4::DPP3	1.5	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.GU.A767.01A	OPHN1::TNMD	0.11	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3JW.01A	OSBPL10::GPD1L	1.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3RB.01A	OSBPL2::CDH4	5.7	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TG.01A	OSBPL9::AGBL4	0.16	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.E7.A541.01A	OSBPL9::CERS5	0.37	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TC.01A	OVOL2::CBLN4	0.013	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMW.01A	P2RY6::MRPS35	100.0	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A677.01A	P4HB::CLCN3	0.61	tier3	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A2ES.01A	P4HB::ZNFX1	0.19	tier4	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7S.01A	PABPC1::VPS13B	0.14	tier1	3UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA75.01A	PACS1::C1orf201	0.01	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3X1.01A	PACS1::ZDHHC24	0.087	tier3	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.ZF.A9RL.01A	PAG1::KIAA1429	0.084	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA58.01A	PALLD::TMEM53	0.043	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.UY.A9PD.01A	PAN3::XPO4	0.14	tier1	Out-of-frame	A0 : B0	A1 : B0	NA
BLCA	TCGA.4Z.AA87.01A	PARD3::CUL2	0.26	tier2	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IT.01A	PARL::ABCC5	0.3	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A7PW.01A	PCBP2::ITGB7	1.1	tier1	CDS-3UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A3PJ.01A	PCBP2::YWHAE	2.7	tier3	3UTR-5UTR	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.GC.A3RB.01A	PCCA::CLYBL	1.8	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A6B2.01A	PCGF3::MYL5	0.17	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A8HG.01A	PCGF3::SPATA24	2.2	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A1AC.01A	PCMTD1::RHOT1	0.5	tier1	Out-of-frame	A0 : B1	A0 : B1	NA
BLCA	TCGA.FD.A62P.01A	PCNXL3::AP000769.1	2.1	tier4	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.BL.A0C8.01A	PCP4L1::NDUFS2	0.009	tier1	In-frame	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.4Z.AA7Q.01A	PCYT1A::TCTEX1D2	100.0	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TD.01A	PDE3B::MICAL2	2.3	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A5KE.01A	PDLIM7::FAM193B	0.002	tier3	Out-of-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.GV.A40G.01A	PDXP::SLC17A9	0.053	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GU.A767.01A	PEX5::PRB2	0.16	tier1	CDS-3UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A5KE.01A	PFKFB3::AKR1C1	0.013	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A5BS.01A	PFKFB3::GDI2	1.3	tier1	Out-of-frame	A1 : B1	A0 : B1	NA
BLCA	TCGA.4Z.AA84.01A	PFKP::CAMK2G	4.7	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.FD.A3B3.01A	PFKP::PSG1	2.7	tier1	In-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.4Z.AA7S.01A	PGAP3::LRRC6	0.58	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7S.01A	PGAP3::MYOCD	0.81	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.DK.A2I6.01A	PGAP3::STARD3	0.27	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A7PW.01A	PGAP3::STARD3	0.27	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.UY.A9PD.01A	PHF12::PIPOX	0.41	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A1AD.01A	PHF21A::ARHGAP1	0.25	tier4	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KP.01A	PHF21A::NUTF2	0.05	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3WY.01A	PHLDB2::KCNAB1	0.073	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A20J.01A	PHTF2::BET1	0.27	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7M.01A	PIGS::SPAG5	1.4	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TH.01A	PIGU::NCOA6	0.54	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A8HC.01A	PIP4K2A::ITFG1	1.6	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GU.A42Q.01A	PIR::TMEM27	1.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KP.01A	PKNOX1::PDE9A	1.3	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.AA3F.01A	PKP2::AC013461.1	0.32	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A40E.01A	PLAGL1::BAI3	1.4	tier4	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A20T.01A	PLBD1::CREBL2	0.32	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.DK.A6B2.01A	PLCH1::MUC13	2.3	tier3	CDS-3UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SR.01A	PLD3::TYK2	0.34	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMX.01A	PLEKHA5::PIK3C2G	0.32	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.CF.A3MH.01A	PLEKHA7::SERGEF	0.93	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A43N.01A	PLEKHA7::TRIM21	1.1	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.LT.A5Z6.01A	PLEKHG3::MTHFD1	0.86	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A3WV.01A	PLEKHH1::GPHN	1.0	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KW.01A	PLEKHH1::MPP5	4.5	tier2	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.GD.A3OS.01A	PLXDC2::VAMP5	0.074	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.CF.A1HS.01A	PLXNA1::CHCHD6	0.37	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SJ.01A	POLA1::CXorf58	1.2	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.CF.A27C.01A	POLE::ANKS1B	0.31	tier1	Out-of-frame	A1 : B0	A0 : B0	non-validated
BLCA	TCGA.FD.A3SJ.01A	POLR2B::RP11-631B21.2	0.18	tier1	CDS-5UTR	A1 : B0	A1 : B0	NA
BLCA	TCGA.FD.A3SR.01A	POLR2E::ZNF420	3.7	tier1	3UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A42E.01A	POT1::RTKN2	0.28	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A85H.01A	PPAP2A::SLC38A9	0.8	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TG.01A	PPAP2A::SLC38A9	0.8	tier4	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA75.01A	PPARG::SYN2	2.2	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A5KE.01A	PPARG::SYN2	2.2	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SJ.01A	PPARG::SYN2	2.2	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
BLCA	TCGA.4Z.AA80.01A	PPFIA1::DYNC2H1	0.21	tier1	In-frame	A1 : B1	A0 : B0	NA
BLCA	TCGA.4Z.AA7O.01A	PPFIA1::SHANK2	0.48	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.UY.A9PH.01A	PPFIA1::SHANK2	0.48	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMX.01A	PPFIBP1::CACNA1C	0.8	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
BLCA	TCGA.UY.A9PE.01A	PPIF::SNX31	100.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.AA3B.01A	PPIP5K2::CAPN12	0.66	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAML.01A	PPME1::KANK1	0.66	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.E7.A85H.01A	PPME1::YIF1A	100.0	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6S.01A	PPP1R10::FLOT1	0.088	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA5P.01A	PPP1R12A::LIN7A	0.36	tier3	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SJ.01A	PPP2R5D::UBR2	3.0	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMW.01A	PPP4R4::MYH6	2.9	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A5KE.01A	PPP6R2::RP3-402G11.5	0.33	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A62S.01A	PPP6R3::SHANK2	1.6	tier1	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A20N.01A	PPP6R3::YAP1	0.081	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA86.01A	PRKCA::NF1	0.72	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.XF.A9SK.01A	PROSC::CHMP1A	0.23	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.UY.A78N.01A	PRUNE::LCE2A	0.75	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.UY.A78N.01A	PRUNE::LCE4A	0.25	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3X1.01A	PSCA::AVL9	3.1	tier3	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A97Q.01A	PSMB3::RP11-723O4.6	0.74	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.UY.A9PD.01A	PSMD11::DPRX	0.81	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.GC.A6I1.01A	PSMD13::HSD17B12	2.1	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.E7.A85H.01A	PSPC1::ACTR8	3.8	tier1	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.BL.A13J.01A	PSPC1::MPHOSPH8	0.11	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.ZF.A9RE.01A	PTEN::RNLS	0.026	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3RB.01A	PTGES2::MLXIP	0.039	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A1AD.01A	PTK2::UGT2A3	1.8	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.KQ.A41Q.01A	PTK2::VPS13B	0.059	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA4X.01A	PTK7::GNMT	0.56	tier4	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.5N.A9KI.01A	PTP4A2::ARFGEF2	0.1	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA87.01A	PTPN12::AC007000.1	0.4	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.C4.A0F7.01A	PTPN14::NSL1	0.098	tier1	Out-of-frame	A1 : B0	A0 : B0	non-validated
BLCA	TCGA.ZF.AA4T.01A	PTPN4::LCT	0.66	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3NA.01A	PTPN6::LEPREL2	0.064	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA51.01A	PTPN6::LRRC23	1.7	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.ZF.A9RN.01A	PTPRK::POPDC3	0.29	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6P.01A	PTPRK::SAMD3	0.067	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3RD.01A	PTPRR::CHPT1	0.87	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.LC.A66R.01A	PUM1::PQLC2	0.034	tier4	CDS-5UTR	A1 : B0	A1 : B0	NA
BLCA	TCGA.UY.A8OB.01A	PVRL2::IGSF23	1.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SP.01A	PXDN::UTRN	3.0	tier3	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A97Q.01A	PYGB::PCSK2	0.2	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3RB.01A	QSER1::PRRG4	0.15	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMY.01A	R3HDM2::ZNF385A	0.009	tier1	In-frame	A1 : B1	A0 : B0	NA
BLCA	TCGA.FT.A3EE.01A	RAB11FIP1::KCNU1	1.0	tier1	In-frame	A1 : B0	A0 : B0	non-validated
BLCA	TCGA.FD.A43N.01A	RAB11FIP4::ACCN1	0.087	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6R.01A	RAB27B::WDR7	0.19	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A62S.01A	RAB30::DPP3	3.8	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMT.01A	RAB35::GCN1L1	0.26	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7S.01A	RAB3IP::CD63	5.1	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A0S7.01A	RAB3IP::NUP107	1.3	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7S.01A	RAB3IP::OS9	0.022	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.CU.A0YO.01A	RAB4A::SNRPB	0.53	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMQ.01A	RAD51B::SMOC1	4.1	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KP.01A	RAF1::IQSEC1	3.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
BLCA	TCGA.DK.A6B5.01A	RAF1::NXPH1	4.2	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA5H.01A	RALA::CAMK2B	0.46	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A8HG.01A	RALGAPA2::C20orf194	0.62	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KT.01A	RALY::TTI1	0.89	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A20W.01A	RANBP10::SLC12A4	3.1	tier1	In-frame	A1 : B1	A0 : B1	NA
BLCA	TCGA.FD.A3SR.01A	RAPGEF2::OCIAD2	3.5	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.G2.AA3B.01A	RAPGEFL1::CDK12	0.027	tier2	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A3WS.01A	RARG::BCAS1	0.053	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.AA3F.01A	RARRES1::RSRC1	0.58	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A7DV.01A	RARRES3::TGFBI	0.093	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IT.01A	RASA2::ZBTB38	0.44	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9T8.01A	RASAL2::ANKRD45	1.9	tier2	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3RC.01A	RASL11A::DHRS12	0.37	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.A9R3.01A	RASSF8::CMAS	1.2	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.HQ.A5NE.01A	RB1::WDFY2	0.97	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.DK.A2I6.01A	RBBP8::TP53	0.31	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.HQ.A2OF.01A	RBL1::GPCPD1	0.32	tier2	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.CU.A0YO.01A	RBM17::PSAP	0.38	tier4	5UTR-CDS	A0 : B1	A0 : B0	NA
BLCA	TCGA.CU.A0YO.01A	RBM27::SLC35E2B	0.034	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.BT.A2LD.01A	RBM39::PRDM5	1.9	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7O.01A	RBM4B::FCHSD2	1.3	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A3PJ.01A	RCOR1::TECPR2	0.031	tier1	In-frame	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.K4.A83P.01A	RFFL::RAD51D	0.64	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A7DV.01A	RFTN1::TMEM40	0.02	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.C4.A0F7.01A	RFX7::LIPC	2.6	tier1	Out-of-frame	A1 : B0	A0 : B0	validated
BLCA	TCGA.FD.A3SJ.01A	RHOA::CACNA2D2	0.11	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A5RH.01A	RHOC::DDX21	0.37	tier3	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3QF.01A	RHPN2::PEPD	0.94	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.CF.A1HS.01A	RICTOR::HCN1	0.15	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3I6.01A	RIMS2::BAALC	0.23	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAML.01A	RNF111::AQP9	0.62	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.A9RN.01A	RNF111::SLTM	0.25	tier1	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.UY.A78L.01A	RNF169::POLD3	0.007	tier1	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SJ.01A	RNF19A::ANKRD46	1.8	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMG.01A	RNF19A::ANKRD46	1.8	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7M.01A	RNF19A::NCALD	0.17	tier2	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A6MB.01A	RNF19A::NCALD	0.17	tier4	3UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3JZ.01A	RNF213::IL22RA1	0.15	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.UY.A78L.01A	RNF41::MSRB3	0.042	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9SK.01A	ROBO1::LPHN3	0.15	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA84.01A	ROCK1::FABP2	2.0	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.BT.A3PK.01A	ROCK1::GUCA2B	0.48	tier3	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.E7.A85H.01A	RP11-73M18.2::TRAF3	0.019	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A5KE.01A	RPAP3::HDAC7	0.34	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3JV.01A	RPL18::PLEKHB2	0.004	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.GU.A42Q.01A	RPL38::DDX21	0.61	tier3	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6P.01A	RPL41::SMARCC2	100.0	tier2	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.4Z.AA7Q.01A	RPS6KB1::VMP1	1.4	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.HQ.A2OE.01A	RPS6KB1::VMP1	1.4	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.PQ.A6FI.01A	RPS6KB1::VMP1	1.4	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A6AV.01A	RPS6KB2::ST3GAL2	1.1	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.UY.A78K.01A	RPUSD3::TMEM111	100.0	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.LC.A66R.01A	RSU1::BAALC	0.032	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3JW.01A	RUNDC2A::NCAN	1.8	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9T4.01A	RUSC2::SHB	0.56	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A5RI.01A	RWDD2B::MX2	0.33	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.C4.A0F1.01A	S100A2::DDX21	2.0	tier3	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A6B2.01A	SAMD13::PRKACB	0.87	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA58.01A	SAMD4B::FBXO27	0.11	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7Q.01A	SAMD8::ADK	0.012	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMZ.01A	SAP30BP::MYO15B	0.02	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KP.01A	SARNP::PAN2	0.66	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A85H.01A	SCAMP4::DAZAP1	0.005	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7W.01A	SCN8A::KCNC2	0.01	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A5BV.01A	SCUBE2::LDHC	0.34	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.CF.A7I0.01A	SCYL2::UTP20	0.15	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.E7.A5KE.01A	SEMA4C::FAM178B	0.36	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.A9RD.01A	SEMA4C::FAM178B	0.36	tier3	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A6B2.01A	SENP2::ABR	4.0	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.K4.A3WV.01A	SEPT6::CUL4B	2.9	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SQ.01A	SERINC2::EIF2AK2	0.063	tier4	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A6B2.01A	SERINC2::PFDN2	100.0	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A677.01A	SERINC2::YY1	0.042	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7Q.01A	SERINC2::ZCCHC17	0.038	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A43Y.01A	SETBP1::NFYC	0.83	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.GU.AATP.01A	SETD5::RAD18	0.12	tier1	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.GU.A42Q.01A	SETDB2::CAB39L	0.81	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.FJ.A3ZF.01A	SF3B1::HSPD1	0.11	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.G2.A2ES.01A	SF3B3::DDX19B	0.066	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.FD.A3SQ.01A	SGSM2::EPN2	0.24	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.GD.A3OS.01A	SH2D6::NCOA2	2.1	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
BLCA	TCGA.E7.A5KE.01A	SH3PXD2A::OBFC1	0.047	tier1	Out-of-frame	A0 : B0	A0 : B1	NA
BLCA	TCGA.UY.A9PB.01A	SH3PXD2A::OBFC1	0.047	tier1	Out-of-frame	A0 : B0	A0 : B1	NA
BLCA	TCGA.XF.AAMQ.01A	SHANK2::ANO1	1.5	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.CF.A3MG.01A	SHANK2::LRTOMT	0.35	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KO.01A	SHPK::GUCY1A2	0.005	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GD.A2C5.01A	SHPRH::NDUFS5	0.49	tier1	5UTR-5UTR	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.GC.A4ZW.01A	SHPRH::RCL1	1.9	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMQ.01A	SHROOM2::FRMPD4	0.015	tier4	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.CF.A1HS.01A	SHROOM2::REPS2	0.61	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.AA3D.01A	SIN3A::OCA2	0.22	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.GU.A764.01A	SIPA1L3::GPI	0.38	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7Q.01A	SKI::PRKCZ	0.46	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMX.01A	SLC16A6::CA4	0.54	tier2	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA71.01A	SLC16A7::HOXC13	1.4	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.UY.A78K.01A	SLC22A23::C6orf145	1.8	tier3	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.HQ.A2OE.01A	SLC22A23::ECHDC1	0.61	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A20V.01A	SLC25A17::RBFOX2	0.59	tier2	Out-of-frame	A0 : B1	A0 : B0	non-validated
BLCA	TCGA.C4.A0F7.01A	SLC25A21::MIPOL1	0.2	tier3	CDS-5UTR	A0 : B0	A0 : B0	validated
BLCA	TCGA.CU.A0YN.01A	SLC2A13::ZNF329	0.84	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3X1.01A	SLC2A9::RAD51	1.9	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GU.A764.01A	SLC35E2B::PFKFB4	0.019	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7M.01A	SLC39A11::ADSS	0.96	tier1	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.BL.A0C8.01B	SLC45A2::AMACR	0.12	tier2	In-frame	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.DK.A1AC.01A	SLC4A4::TMPRSS11E	2.0	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.K4.A4AC.01A	SLC7A1::CDX2	0.096	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7R.01A	SLC9A8::TOM1L2	0.16	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.UY.A9PD.01A	SLFN11::CCL14	0.022	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.GU.A42Q.01A	SMAD3::AAGAB	2.2	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.UY.A9PE.01A	SMARCB1::SNW1	0.13	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.BL.A3JM.01A	SMARCC1::DOCK3	1.9	tier1	In-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.BT.A20W.01A	SMARCC1::SHISA5	0.54	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.A9RD.01A	SMCHD1::NDC80	0.67	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.K4.AAQO.01A	SMG7::GLT25D2	0.32	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A2I1.01A	SMG9::KCNN4	2.3	tier1	CDS-3UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMT.01A	SMYD2::PTP4A1	0.95	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6W.01A	SMYD3::ZNF695	0.64	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A1A6.01A	SNRNP40::BAI2	0.025	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.XF.A9SV.01A	SNRNP70::CDC42EP5	100.0	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.GC.A4ZW.01A	SNTB1::ZNF250	0.008	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TG.01A	SNX13::GLCCI1	0.027	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3B5.01A	SNX30::KIAA1958	3.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BL.A0C8.01A	SNX30::PXT1	0.16	tier1	CDS-5UTR	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.G2.A3VY.01A	SNX31::PABPC1	1.1	tier1	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.HQ.A2OF.01A	SOCS7::MAPT	0.52	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IS.01A	SORCS2::SH3TC1	0.27	tier2	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A2I1.01A	SPAG6::PLXDC2	0.31	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BL.A0C8.01A	SPAG9::PCMT1	0.58	tier1	Out-of-frame	A1 : B0	A0 : B0	non-validated
BLCA	TCGA.DK.A3X2.01A	SPEN::EFHD2	0.31	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.K4.A3WV.01A	SPEN::FBLIM1	0.46	tier1	CDS-5UTR	A1 : B0	A1 : B0	NA
BLCA	TCGA.K4.A5RH.01A	SREBF1::MED9	0.008	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SJ.01A	SRGAP3::FAM83H	0.041	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA51.01A	SRP68::CDK3	0.49	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA84.01A	SRP68::XIRP2	1.1	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.FJ.A3Z7.01A	SRSF4::CREB5	0.059	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.HQ.A2OE.01A	SSBP3::EDA	0.009	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KP.01A	ST3GAL3::ZMAT4	0.21	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A3WU.01B	ST6GALNAC2::BRIP1	4.2	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A4ZW.01A	STAG2::AMMECR1	0.34	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A4ZW.01A	STAG2::RGAG1	0.028	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.GD.A3OS.01A	STAM2::NOSTRIN	0.15	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.FD.A6TH.01A	STARD3::ABR	0.046	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9SW.01A	STARD3::PPP1R1B	0.19	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
BLCA	TCGA.KQ.A41P.01A	STARD7::LRRN1	1.6	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9SU.01A	STIM1::RP11-150O12.1	0.36	tier1	CDS-3UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6R.01A	STK11::C19orf26	0.024	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA87.01A	STK24::SLC15A1	0.35	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.BT.A2LA.01A	STK24::TMTC4	0.56	tier1	In-frame	A1 : B0	A0 : B0	non-validated
BLCA	TCGA.DK.A1A6.01A	STK3::MRPL48	0.74	tier1	Out-of-frame	A1 : B0	A0 : B0	non-validated
BLCA	TCGA.DK.A3X2.01A	STRN3::RNASE10	0.047	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.KQ.A41Q.01A	STXBP6::SLC44A4	0.11	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A1AC.01A	SUV420H1::MYO1D	0.31	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7R.01A	SWT1::DCAF8	0.013	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMW.01A	SYNE2::ATG2B	0.061	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMG.01A	SYNJ2::SCN11A	0.49	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.XF.A8HC.01A	SYNRG::SHC2	2.5	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KP.01A	SYS1::IDO2	0.068	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9SP.01A	TAB2::UST	2.4	tier3	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA87.01A	TAF3::APP	0.18	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3QF.01A	TAF4::LAMA5	0.54	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SM.01A	TALDO1::CLCN3	0.091	tier3	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TK.01A	TANC1::PKP4	1.5	tier2	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A1AC.01A	TAOK1::RB1CC1	0.32	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IN.01A	TAPT1::LDB2	0.43	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IS.01A	TBC1D14::HTRA3	0.45	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA4U.01A	TBC1D15::CPSF6	0.11	tier1	CDS-3UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3B3.01A	TBC1D15::RP11-419C5.2	2.0	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A20J.01A	TBC1D4::TTC15	0.57	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A5KE.01A	TBC1D8::CREG2	1.5	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.SY.A9G5.01A	TBC1D8::RNF149	4.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.C4.A0F6.01A	TBC1D8B::RNF128	0.57	tier1	In-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.CU.A3KJ.01A	TBL1X::GPR143	4.5	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.AA3B.01A	TBL1XR1::IQCJ-SCHIP1	0.061	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.C4.A0F7.01A	TCF12::NCOA3	0.5	tier1	CDS-5UTR	A1 : B0	A1 : B0	non-validated
BLCA	TCGA.XF.A9ST.01A	TEAD1::CD47	0.48	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A85H.01A	TEAD1::PARVA	0.12	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GU.A42Q.01A	TECR::ICAM3	0.26	tier1	Out-of-frame	A0 : B0	A1 : B0	NA
BLCA	TCGA.FD.A6TD.01A	TFDP1::CUL4A	0.026	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.XF.AAMW.01A	TFIP11::IL17RA	1.1	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.G2.A2ES.01A	TFRC::TCTEX1D2	0.12	tier1	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SO.01A	TGFB1::FXYD5	100.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GU.AATP.01A	THOC5::PIBF1	1.9	tier3	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BL.A0C8.01A	TJP2::FXN	1.5	tier1	5UTR-CDS	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.GV.A3QF.01A	TK1::DNAH17	0.79	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMZ.01A	TM2D2::GOT1L1	0.58	tier2	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SM.01A	TMBIM6::CLCN3	0.78	tier3	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A2I6.01A	TMCC1::ARSG	0.22	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A6AV.01A	TMCO7::FGF3	0.15	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A7DV.01A	TMEM123::CENPP	0.32	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GD.A3OS.01A	TMEM127::STAM	0.13	tier1	5UTR-CDS	A0 : B1	A0 : B1	NA
BLCA	TCGA.DK.AA75.01A	TMEM135::FGD5	0.79	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A1AC.01A	TMEM201::SPSB1	1.5	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9SU.01A	TMEM87B::MERTK	0.21	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A43P.01A	TMEM99::FBXO47	2.0	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SR.01A	TNFAIP2::ANKS1A	0.022	tier3	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9ST.01A	TNFAIP8::DMXL1	1.4	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A2EJ.01A	TNFRSF10A::EPB49	0.93	tier2	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3X2.01A	TNNI3::ZNF607	0.037	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMX.01A	TNRC6B::FAM83F	0.39	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FJ.A3Z7.01A	TNRC6B::TPST2	1.4	tier3	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SO.01A	TOMM40::PDZRN4	0.22	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A6B2.01A	TOP2B::NGLY1	1.7	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.K4.A3WU.01B	TOP3A::ZCCHC8	2.1	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3QG.01A	TPM1::ALK	0.18	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3I6.01A	TPX2::HM13	0.81	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
BLCA	TCGA.DK.A3IV.01A	TPX2::REM1	0.061	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.SY.A9G0.01A	TRAF2::CACNA1B	0.24	tier3	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TD.01A	TRAF7::MAPK8IP3	0.21	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3X2.01A	TRAPPC9::EIF2C2	0.004	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAN0.01A	TRIB1::SAE1	4.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.SY.A9G0.01A	TRIM35::CCNB1IP1	0.07	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.FJ.A3Z7.01A	TRMT11::RNF217	0.77	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KP.01A	TRMT61A::AMN	0.074	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.KQ.A41N.01A	TRPM4::PPFIA3	0.056	tier2	Out-of-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.GD.A3OS.01A	TRUB2::KCNT1	1.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SJ.01A	TSC22D2::FGF12	1.8	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A2I1.01A	TSEN2::PPARG	2.4	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A4IJ.01A	TSEN2::PPARG	2.4	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3RD.01A	TSEN2::PPARG	2.4	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMY.01A	TSEN2::SYN2	0.24	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SJ.01A	TSNARE1::GDF6	0.079	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMG.01A	TSPAN13::BZW2	0.48	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A6B2.01A	TSPAN15::HK1	0.24	tier1	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.XF.AAMW.01A	TSPO::PRR5	0.27	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.UY.A9PE.01A	TTC23L::CACNA2D3	0.18	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A4IJ.01A	TTC28::ARHGAP15	0.36	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A1AC.01A	TTC7B::RPS6KA5	0.52	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.GU.AATQ.01A	TTC9C::BSCL2	1.6	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.FJ.A3ZF.01A	TUBGCP4::TMEM62	1.0	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SJ.01A	TULP4::ZDHHC14	0.24	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BL.A0C8.01A	TWF2::FSTL4	1.1	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.G2.A2EF.01A	TXNL1::LRP1B	1.2	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.XF.AAMW.01A	UBAP2::LINGO2	0.13	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A85H.01A	UBE3C::FAF1	2.8	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6P.01A	UBL3::CDK8	0.48	tier3	Out-of-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.BL.A3JM.01A	UBL3::CKAP2	0.044	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.UY.A78M.01A	UBR5::KB-1980E6.3	0.74	tier1	In-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.UY.A78M.01A	UBR5::ODF1	0.11	tier1	In-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.XF.AAMX.01A	UBTD2::SH3PXD2B	0.92	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A3VY.01A	UCK2::DARS2	100.0	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.GU.A764.01A	UCK2::MRPL9	0.76	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.CF.A27C.01A	UNC13B::PTPRD	0.65	tier2	Out-of-frame	A0 : B0	A0 : B0	validated
BLCA	TCGA.ZF.A9RM.01A	UNC45A::MAN2A2	0.89	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.AA6W.01A	UPF1::CRTC1	0.38	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3QH.01A	UPK2::SUPT16H	0.55	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9ST.01A	UQCRC1::PRKAR2A	1.6	tier1	CDS-3UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.R3.A69X.01A	UQCRC2::CYB5RL	1.1	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3RB.01A	USP12::E2F3	0.018	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A4ZW.01A	USP31::ELAVL2	0.42	tier2	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA7M.01A	USP31::PRKCB	0.87	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
BLCA	TCGA.ZF.A9RL.01A	USP31::RHD	1.1	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.BL.A13J.01A	USP34::FAM161A	1.5	tier1	In-frame	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.GV.A3QH.01A	USP38::IL17F	0.017	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA4N.01A	USP4::CCDC13	1.2	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.E7.A7PW.01A	USP4::RHOA	0.81	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TE.01A	USP54::NCRNA00245	0.45	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAML.01A	USP7::SMARCA2	0.32	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
BLCA	TCGA.G2.AA3F.01A	UXS1::C2orf40	0.72	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BT.A20V.01A	VAC14::WWOX	0.52	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.XF.AAMG.01A	VEGFA::HIST1H4H	0.13	tier1	CDS-3UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.BL.A0C8.01A	VGLL4::LIMD1	0.43	tier1	In-frame	A1 : B0	A0 : B0	validated
BLCA	TCGA.FD.A43Y.01A	VGLL4::TAMM41	0.75	tier4	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KW.01A	VGLL4::TMEM40	0.007	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.XF.A8HD.01A	VGLL4::UPF2	0.017	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.K4.A5RH.01A	VIM::PTPRC	0.41	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IM.01A	VPS13B::ANKRD46	0.47	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A4AC.01A	VPS13B::C8orf56	0.85	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.UY.A78O.01A	VPS13B::C8orf56	0.85	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A2I6.01A	VPS13B::CDADC1	0.14	tier1	In-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.DK.A1A6.01A	VPS13B::MYO9B	1.1	tier1	Out-of-frame	A1 : B0	A0 : B0	non-validated
BLCA	TCGA.DK.A2I1.01A	VPS35::PHKB	0.99	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3IV.01A	VPS41::NPSR1	0.33	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A2EF.01A	VPS54::PELI1	1.7	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAML.01A	VPS72::GABPB2	0.49	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.CU.A3QU.01A	WDR37::FAM107B	0.051	tier3	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GC.A3RB.01A	WDR37::TUBAL3	0.29	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.2F.A9KP.01A	WDR59::CHST5	0.34	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.AA4T.01A	WDR6::CPNE8	0.55	tier1	Out-of-frame	A0 : B0	A1 : B0	NA
BLCA	TCGA.BT.A3PH.01A	WDR62::HCST	0.084	tier1	In-frame	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.G2.A3VY.01A	WDR70::CACNA2D4	0.18	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A3VY.01A	WDSUB1::GPD2	1.4	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.ZF.A9RF.01A	WDYHV1::WISP2	100.0	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A3WV.01A	WIPF2::MSL1	0.33	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A8HH.01A	XPO1::C2orf74	0.15	tier1	CDS-5UTR	A1 : B0	A1 : B0	NA
BLCA	TCGA.E5.A4TZ.01A	XPO6::FBXO31	0.16	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.H4.A2HQ.01A	XPO6::LRRC48	0.097	tier1	CDS-5UTR	A0 : B0	A0 : B0	non-validated
BLCA	TCGA.K4.A3WU.01B	XPR1::ARHGEF11	0.17	tier3	Out-of-frame	A1 : B1	A0 : B0	NA
BLCA	TCGA.DK.AA75.01A	XPR1::DEDD	0.061	tier3	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.BT.A0S7.01A	YEATS4::LYZ	0.27	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.GU.A42P.01A	YES1::SCFD2	0.15	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SJ.01A	YIPF1::MRPL15	0.89	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAMZ.01A	YWHAZ::GAL	0.008	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A2ES.01A	Z83844.2::LGALS1	0.68	tier1	In-frame	A0 : B1	A0 : B0	NA
BLCA	TCGA.DK.A3IQ.01A	ZBTB5::SMARCA2	0.28	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.AAML.01A	ZC3H7A::GSPT1	0.081	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9T4.01A	ZCCHC7::TEK	0.44	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.BL.A3JM.01A	ZCCHC8::RSRC2	0.36	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A3WU.01B	ZCCHC8::TOP3A	2.1	tier1	NA	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3JW.01A	ZDHHC20::EFHA1	0.44	tier3	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.HQ.A2OE.01A	ZDHHC20::EFHA1	0.44	tier4	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.UY.A9PB.01A	ZFC3H1::PPFIA2	0.4	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.DK.A3X2.01A	ZFP30::CEACAM7	0.033	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A4AC.01A	ZFYVE26::RBM25	0.13	tier3	Out-of-frame	A1 : B1	A1 : B0	NA
BLCA	TCGA.FD.A43P.01A	ZMYND11::CDH18	0.55	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TG.01A	ZNF148::RPRD2	0.005	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
BLCA	TCGA.CU.A3QU.01A	ZNF267::AGBL4	5.6	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.XF.A9SK.01A	ZNF276::VAC14	0.012	tier2	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.2F.A9KR.01A	ZNF326::CCDC18	0.47	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.BT.A20J.01A	ZNF335::ZSWIM3	1.5	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.GV.A3JW.01A	ZNF430::CD19	0.95	tier4	Out-of-frame	A0 : B0	A1 : B0	NA
BLCA	TCGA.GV.A3JZ.01A	ZNF430::KCNIP4	0.099	tier2	In-frame	A1 : B0	A1 : B0	NA
BLCA	TCGA.DK.A2I1.01A	ZNF500::MMP25	0.01	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.K4.A3WS.01A	ZNF526::DEDD2	0.022	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.HQ.A2OE.01A	ZNF544::CCDC61	0.79	tier2	In-frame	A1 : B1	A0 : B0	NA
BLCA	TCGA.HQ.A2OE.01A	ZNF598::C16orf62	0.003	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.CU.A0YN.01A	ZNF606::RDH13	0.13	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.FJ.A3ZF.01A	ZNF613::SIGLEC7	1.8	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A3SM.01A	ZNF638::C2orf78	0.74	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
BLCA	TCGA.E7.A5KE.01A	ZNF704::DLGAP1	0.074	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
BLCA	TCGA.GU.A42Q.01A	ZNF808::C19orf21	0.1	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
BLCA	TCGA.G2.A3VY.01A	ZNF844::C3orf26	0.08	tier3	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.FD.A6TG.01A	ZNHIT3::WDR60	1.5	tier1	In-frame	A0 : B0	A0 : B0	NA
BLCA	TCGA.4Z.AA84.01A	ZW10::UPK2	0.35	tier1	Out-of-frame	A0 : B0	A0 : B0	NA