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Cancer Type-Centric Fusions Results

Cancer Type: Tier:

Tumor type can be selected from twelve tumor types.

Cancer	TCGA SampleId	FusionPair	E-value	Tier	Frame	phosphorylation	ubiquitination	WGS
PRAD	TCGA.G9.6348.01A	A2LD1::DCLK1	0.008	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7744.01A	AAK1::KCMF1	0.57	tier1	In-frame	A1 : B1	A0 : B0	non-validated
PRAD	TCGA.HC.7209.01A	AARSD1::CCR7	0.048	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8I7.01A	ABCC1::PRKCB	0.044	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.VP.A876.01A	ABCC4::CCDC169	0.22	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5764.01A	ABCD3::DPYD	0.16	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6342.01A	ABCF3::PLEKHB2	0.4	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9LN.01A	ABL1::SLC38A10	0.021	tier3	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.V1.A9OX.01A	AC004410.1::DOT1L	0.007	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9KY.01A	AC005522.1::POR	0.071	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9LN.01A	AC091153.1::YBX2	0.23	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8ML.01A	ACACA::MMP28	0.93	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A7NF.01A	ACER2::C8orf37	0.92	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.2A.AAYU.01A	ACP6::INTS7	0.98	tier1	Out-of-frame	A0 : B1	A0 : B1	NA
PRAD	TCGA.V1.A9O9.01A	ACPP::ATP2C1	0.56	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5512.01A	ACPP::OGT	0.05	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7233.01A	ACPP::SAFB2	0.37	tier1	In-frame	A0 : B1	A0 : B0	non-validated
PRAD	TCGA.G9.6499.01A	ACPP::STAT6	0.45	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6498.01A	ACPP::ZNF462	0.095	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.WW.A8ZI.01A	ACPP::ZNF462	0.095	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5750.01A	ACSL3::SGPP2	2.4	tier1	5UTR-CDS	A0 : B0	A0 : B0	non-validated
PRAD	TCGA.CH.5751.01A	ACSL3::SGPP2	2.4	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9LZ.01A	ACSL6::CDS2	0.62	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	ACSM1::DNAH3	0.022	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6371.01A	ACTB::GNB2L1	1.2	tier4	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A632.01A	ACTB::GNB2L1	1.2	tier4	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6371.01A	ACTG1::CCT5	0.002	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7736.01A	ACTG1::ZNF827	1.8	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46E.01A	ACTN4::MGST2	0.14	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.G9.6361.01A	ACTR1A::ARMC4	0.1	tier1	In-frame	A0 : B0	A1 : B0	NA
PRAD	TCGA.VP.A87K.01A	ACTR1A::OBFC1	0.49	tier1	Out-of-frame	A0 : B0	A1 : B0	NA
PRAD	TCGA.G9.6348.01A	ACVR2A::AKT3	0.086	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7318.01B	ACVR2A::KANK1	0.12	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5510.01A	ADAM9::RGS20	0.29	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A83I.01A	ADAMTS17::RTKN2	1.5	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A83J.01A	ADAMTS9::SYNPR	0.72	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5503.01A	ADI1::ZFP91	0.21	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8IH.01A	ADK::KCNMA1	1.8	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KC.A7F6.01A	ADNP::SCCPDH	1.9	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.J4.AATZ.01A	ADRBK2::ZNRF3	2.4	tier1	Out-of-frame	A1 : B1	A1 : B0	NA
PRAD	TCGA.CH.5763.01A	AFF1::PAQR3	0.27	tier1	CDS-3UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KC.A4BV.01A	AFF1::RBFOX1	1.4	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8HO.01A	AFF3::HDAC5	0.01	tier4	Out-of-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.TK.A8OK.01A	AFF4::SNTG2	0.64	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7318.01B	AGAP1::AC112715.2	100.0	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.HI.7168.01A	AGAP1::ADAMTS2	0.12	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.Y6.A9XI.01A	AGAP1::RHOU	0.96	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.J9.A8CL.01A	AGAP1::SP140L	0.23	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8MF.01A	AGBL4::FAF1	0.05	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A872.01A	AGFG1::CCDC169	1.9	tier2	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7315.01A	AGFG1::TET3	0.79	tier2	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.J4.AATZ.01A	AGL::ARHGDIB	4.0	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.XJ.A9DQ.01A	AGPAT3::ELK4	2.1	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7080.01A	AGPAT5::PRSS55	0.003	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5522.01A	AGPAT6::ADAM9	0.25	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	AHCYL2::SND1	0.63	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7784.01A	AHNAK::ZNFX1	1.4	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WY.01A	AKAP10::C17orf39	2.0	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9KY.01A	AKT3::ADSS	1.8	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.KK.A8IL.01A	AKT3::PPP2R2A	0.059	tier1	Out-of-frame	A1 : B0	A0 : B1	NA
PRAD	TCGA.HC.7736.01A	AL137003.1::GLDN	0.048	tier2	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.7510.01A	AL353715.1::STMN3	0.033	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.VP.A87K.01A	AL359075.1::EGF	0.91	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7744.01A	ALDH1A3::VPS53	0.15	tier4	3UTR-CDS	A0 : B0	A0 : B0	non-validated
PRAD	TCGA.G9.6494.01A	ALDH3A2::PITPNM2	0.078	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8I6.01A	ALDOA::NDUFV1	1.7	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.2A.A8W3.01A	ALG12::CDT1	0.78	tier4	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5518.01A	ALKBH8::C11orf65	0.18	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.8474.01A	AMACR::NDUFAF2	0.36	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.8470.01A	AMBRA1::TRPC6	0.25	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5524.01A	AMMECR1L::TNFRSF10C	0.99	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.XQ.A8TA.01A	ANAPC7::PAH	1.6	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.KK.A8IH.01A	ANK3::USP9Y	0.44	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WY.01A	ANKIB1::CDK14	0.32	tier2	5UTR-3UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.M7.A725.01A	ANKRD11::CDH15	0.27	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SK.01B	ANKRD13C::FZR1	1.8	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.XQ.A8TB.01A	ANKRD22::LRRTM3	2.4	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6499.01A	ANKRD37::MTERFD2	0.8	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	ANO7::RALBP1	0.64	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7738.01A	AP1AR::NDST4	1.2	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.VP.A875.01A	AP1B1::CLTCL1	0.24	tier1	5UTR-CDS	A0 : B1	A0 : B1	NA
PRAD	TCGA.CH.5751.01A	AP3B2::HOMER2	0.075	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A875.01A	AP3D1::KCTD19	1.8	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8I9.01A	APBA1::RAD23B	0.16	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5788.01A	APC::KIAA0825	0.58	tier1	Out-of-frame	A1 : B0	A0 : B0	validated
PRAD	TCGA.HC.7213.01A	APLP2::PLAT	0.36	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E1.01A	ARF1::HSPA9	0.82	tier1	5UTR-CDS	A0 : B1	A0 : B1	NA
PRAD	TCGA.YL.A8HL.01A	ARFGAP2::FBRSL1	0.59	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A59X.01A	ARGLU1::CXCR4	0.8	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8IG.01A	ARHGAP10::FBXW2	2.8	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SA.01A	ARHGAP12::SVIL	0.4	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A65J.01A	ARHGAP18::THEMIS	0.015	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.KC.A7F6.01A	ARHGAP21::PDCD11	1.7	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.G9.A9S0.01A	ARHGAP23::ZSCAN2	0.24	tier1	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.KK.A6E0.01A	ARHGAP24::MAPK10	0.68	tier2	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5519.01A	ARHGAP29::DNAJC6	1.2	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8II.01A	ARHGAP32::CWF19L2	0.34	tier1	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.YL.A8SK.01B	ARHGAP32::PRDM10	2.3	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8ML.01A	ARHGAP44::C17orf78	0.98	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.8469.01A	ARHGAP6::KDM6A	3.8	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7115.01A	ARHGEF26::LANCL1	0.26	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5761.01A	ARHGEF3::FDFT1	1.1	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WL.01A	ARHGEF38::ZNF622	0.33	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5510.01A	ARHGEF7::PTEN	0.042	tier1	In-frame	A1 : B1	A1 : B0	NA
PRAD	TCGA.HC.7821.01A	ARID1A::SEC11A	0.42	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E1.01A	ARMC8::IFT57	0.16	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5514.01A	ARMC8::TF	0.042	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.J9.A8CL.01A	ARNT::RP11-126K1.2	100.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7748.01A	ARNT2::NDST1	0.54	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7752.01A	ARNT2::ZFAND3	0.79	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	ARPC1A::TRRAP	0.063	tier1	Out-of-frame	A0 : B0	A1 : B0	NA
PRAD	TCGA.YL.A8SJ.01B	ARPC1A::VAMP4	3.8	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5542.01A	ARRDC3::SGCD	1.4	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7210.01A	ASAH1::DDX21	1.5	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5498.01A	ASB7::DEXI	0.28	tier1	CDS-3UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A67S.01A	ASB8::DGKA	0.27	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A87C.01A	ASCC3::SYNE1	0.016	tier2	In-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.EJ.5518.01A	ASH1L::NSL1	3.4	tier1	In-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.HC.A6AO.01A	ASPH::RP1	0.032	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.A9S7.01A	ASTN2::TNFAIP8L1	0.053	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8IM.01A	ASXL2::C2orf44	0.1	tier3	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.A6AN.01A	ASXL2::MORC3	0.39	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A83I.01A	ATAD1::JMJD1C	0.12	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.VN.A943.01A	ATF3::USH2A	0.11	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9LY.01A	ATF6::VCL	0.12	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7784.01A	ATF7IP::TMPRSS2	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.YL.A9WL.01A	ATF7IP::TXNRD1	0.69	tier4	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.2A.AAYF.01A	ATG2A::C11orf48	0.66	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KC.A7FA.01A	ATG4C::C18orf42	0.24	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6342.01A	ATG4C::LEPR	0.071	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E8.01A	ATM::CARD18	1.0	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7749.01A	ATMIN::GPR19	1.1	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SQ.01B	ATP11A::DHRS12	0.62	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5507.01A	ATP11B::CARS	2.5	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.XJ.A9DX.01A	ATP11B::HECW1	6.2	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.7737.01A	ATP1A1::FN1	1.2	tier4	3UTR-CDS	A0 : B1	A0 : B0	non-validated
PRAD	TCGA.V1.A9O9.01A	ATP2C1::CPNE4	0.98	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6356.01A	ATP5B::THSD4	0.014	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O5.01A	ATP6AP1::CCT5	0.96	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6348.01A	ATP6AP2::EIF3M	0.009	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6371.01A	ATP6V1D::CBS	0.59	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.XJ.A9DX.01A	ATP8B2::ADAR	1.4	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7330.01A	ATP8B4::OCA2	2.2	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5514.01A	ATP9A::TRPC4AP	0.27	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9ZG.01A	ATXN2::ADAM10	0.84	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6354.01A	ATXN2::TRIM37	0.062	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5767.01A	AZIN1::ZFPM2	0.79	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A6AL.01A	BANK1::AGMO	1.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.XK.AAJT.01A	BANK1::C4orf22	0.11	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8S8.01A	BANK1::GSTCD	0.54	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8265.01A	BAZ1B::POMZP3	0.008	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8265.01A	BAZ1B::ZP3	0.11	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.M7.A725.01A	BBS4::CSNK1G1	0.059	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7209.01A	BCAM::PLAT	0.067	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7789.01A	BCKDHB::ME1	0.45	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.ZG.A9LN.01A	BCL2L12::FLT3LG	0.067	tier1	3UTR-3UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HI.7168.01A	BCL2L13::GAB4	1.5	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.XK.AAJA.01A	BCL2L14::GPR19	0.44	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8ID.01A	BICD1::CCDC91	0.071	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WL.01A	BIRC6::EML4	0.89	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KC.A4BL.01A	BIRC6::EML6	1.3	tier3	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7231.01A	BMPR1A::ENTPD1	1.6	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.SU.A7E7.01A	BMPR1B::ETV1	0.38	tier4	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7330.01A	BMPR1B::PDLIM5	0.099	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A4ZV.01A	BMPR1B::PDLIM5	0.099	tier4	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.8258.01A	BMPR2::MARCH4	1.8	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7AU.01A	BMS1::PHYHIPL	0.54	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.2A.A8W1.01A	BRCA1::NF1	0.27	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KC.A4BL.01A	BRD1::RTN4RL1	0.043	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.8469.01A	BRD4::AKAP8L	0.39	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5766.01A	BRK1::PTP4A2	0.6	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7081.01A	BRWD1::RAPGEF4	2.0	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5510.01A	BTAF1::PTPRR	0.021	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SA.01A	BTBD9::LASP1	0.099	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.V1.A9ZK.01A	BZW2::RRM1	2.5	tier3	5UTR-CDS	A0 : B1	A0 : B1	NA
PRAD	TCGA.VP.A87K.01A	C10orf26::C6orf105	0.28	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8261.01B	C10orf68::CCDC7	0.11	tier4	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.8265.01B	C10orf68::CCDC7	0.11	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6361.01A	C11orf30::CDH23	0.22	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E6.01A	C11orf49::C11orf24	0.49	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6377.01A	C11orf49::CD5	0.22	tier2	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8HL.01A	C11orf49::NUP98	0.039	tier4	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6371.01A	C11orf75::FAM129B	1.9	tier3	3UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.M7.A723.01A	C11orf75::FDFT1	0.3	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8I8.01A	C12orf29::IRAK4	0.12	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5515.01A	C12orf51::C15orf60	6.1	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9ZR.01A	C16orf62::CDR2	0.098	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.4L.AA1F.01A	C16orf74::ATAD1	0.51	tier2	Out-of-frame	A0 : B1	A0 : B1	NA
PRAD	TCGA.G9.6494.01A	C17orf65::DCAF5	0.47	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.V1.A8WS.01A	C17orf81::ZNF614	0.36	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9M4.01A	C18orf1::CD226	0.12	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5507.01A	C18orf1::INTS8	0.12	tier1	5UTR-CDS	A0 : B0	A0 : B1	NA
PRAD	TCGA.YL.A8HM.01A	C18orf1::NOVA1	0.36	tier2	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.ZG.A9L2.01A	C18orf19::PSMG2	0.074	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9LZ.01A	C19orf2::PEPD	2.2	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7818.01A	C19orf48::CHI3L2	0.45	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KC.A4BL.01A	C19orf6::CNN2	0.24	tier1	In-frame	A0 : B1	A0 : B1	NA
PRAD	TCGA.EJ.5519.01A	C1orf132::CHRM3	0.62	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7321.01A	C1orf174::SNAP47	0.49	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7784.01A	C1orf55::SLC22A15	2.3	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6353.01A	C1orf86::ZC3H11A	0.66	tier3	3UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5518.01A	C1orf9::RASAL2	0.19	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.V1.A9ZG.01A	C20orf43::C20orf152	100.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.M7.A725.01A	C21orf2::UMODL1	0.12	tier1	CDS-3UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E1.01A	C21orf63::CBR3	1.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A48F.01A	C2orf63::FAM98A	0.064	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E8.01A	C3orf26::ENPP6	2.0	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J9.A8CL.01A	C4orf29::SLC25A31	0.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5504.01A	C4orf41::RBM46	0.17	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7821.01A	C5::DBC1	0.62	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.XQ.A8TA.01A	C5::SEMA4D	1.1	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8ID.01A	C5orf45::RNF130	0.4	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8ID.01A	C6orf168::ASCC3	7.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9ZG.01A	C7orf36::ALS2	0.79	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.TP.A8TV.01A	C7orf44::AMPH	0.32	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.ZG.A9L6.01A	C7orf44::GCK	0.83	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8ID.01A	C7orf50::MMD2	0.18	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A8FN.01A	C7orf73::BRAF	0.39	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7233.01A	C8orf76::ATAD2	0.076	tier4	Out-of-frame	A0 : B0	A0 : B0	non-validated
PRAD	TCGA.CH.5751.01A	C9orf102::ATP8A1	0.032	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A6AN.01A	C9orf102::IPPK	0.72	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9LY.01A	CAB39L::FNDC3A	0.81	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7230.01A	CAB39L::USP12	0.048	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5766.01A	CACNA1C::DDX55	0.029	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A8FO.01A	CACNA1C::WWP2	0.014	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.CH.5739.01A	CADM1::SORL1	1.4	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7791.01A	CADM2::ROBO1	1.0	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
PRAD	TCGA.FC.A4JI.01A	CADM2::UBE2E2	0.38	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7330.01A	CADPS2::DNAH11	0.88	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A6E5.01A	CALR::BRD2	0.095	tier1	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46B.01A	CAMKK2::KDM2B	0.3	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A65J.01A	CAMKK2::KDM2B	0.3	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6333.01A	CAMKK2::KDM2B	0.3	tier1	3UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.VN.A88L.01A	CANT1::PPP3CA	0.59	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5761.01A	CAPN2::SMARCA1	1.8	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6371.01A	CAPNS1::ARHGEF26	0.27	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.H9.A6BY.01A	CAPNS1::CCDC149	0.29	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5506.01A	CAPNS1::MTA2	0.004	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.FC.A4JI.01A	CAPZA2::C3orf26	100.0	tier2	In-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.HC.8265.01A	CAPZB::CFL1	0.45	tier2	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6DY.01A	CARM1::CASP14	1.2	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9L1.01A	CASK::C6orf70	2.3	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.TP.A8TT.01A	CASP7::LRRC27	0.78	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5792.01A	CASP8::NRP2	0.2	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A67S.01A	CASZ1::PRKD2	0.084	tier4	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J9.A8CL.01A	CBL::CXCR5	0.13	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.G9.6339.01A	CBLB::IL17RE	0.67	tier2	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	CBLB::KIAA1524	0.96	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5510.01A	CCDC122::LHFP	1.2	tier4	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9KY.01A	CCDC22::ZNF673	0.23	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O5.06A	CCDC3::FXYD1	0.22	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9KY.01A	CCDC57::RAB40B	0.34	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.CH.5739.01A	CCDC80::ANKS1A	0.087	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.8474.01A	CCND3::EXOC4	0.1	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5761.01A	CD47::ZFR	0.24	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5499.01A	CD63::AARS	0.15	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7747.01A	CD81::SURF4	0.16	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E1.01A	CD9::PPP3CA	0.26	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9OH.01A	CDC14A::DEFB135	0.4	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.XQ.A8TA.01A	CDC14B::AUH	0.31	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7213.01A	CDC27::MYL4	2.3	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5499.01A	CDC42BPA::ZNF678	0.98	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SP.01B	CDC42EP3::GXYLT2	2.3	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.A9S7.01A	CDH1::CA1	0.14	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.VP.A879.01A	CDH1::TRHDE	0.28	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5525.01A	CDK12::MED1	1.7	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5519.01A	CDK14::DLD	0.45	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.VN.A88K.01A	CDK7::RIN3	0.005	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9NI.01A	CDK7::SH3BGR	100.0	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.8264.01B	CDYL2::DYNLRB2	100.0	tier3	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.7744.01A	CDYL2::VEPH1	1.2	tier1	Out-of-frame	A1 : B0	A0 : B0	validated
PRAD	TCGA.EJ.5530.01A	CENPN::C16orf62	0.31	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	CEP164::APOC3	0.41	tier3	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8HM.01A	CEP170::IFI16	0.2	tier2	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5518.01A	CEP350::GPR161	0.11	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SL.01B	CEP350::LEPROT	0.18	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O5.01A	CEP70::TNFSF10	0.66	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O5.06A	CEP70::TNFSF10	0.66	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A8D0.01A	CERK::SCUBE1	0.05	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	CERS6::RNF25	0.038	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7328.01A	CGRRF1::WDHD1	1.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A6AP.01A	CHCHD6::MYLK	1.4	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.A6AP.01A	CHD1::SLCO6A1	0.013	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	CHD1L::LCE1A	0.28	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9KY.01A	CHD6::PTPRT	0.41	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.XK.AAIV.01A	CHD7::FAM164A	0.039	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7077.01A	CHD8::AP1S1	0.38	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5518.01A	CHRM3::SYT14	0.038	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	CHST8::PDCD5	0.29	tier1	5UTR-CDS	A0 : B1	A0 : B1	NA
PRAD	TCGA.V1.A8WS.01A	CHTF8::TBC1D22A	0.11	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9LZ.01A	CIR1::SCRN3	0.72	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.VP.A875.01A	CLASP2::NMNAT3	2.2	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7783.01A	CLDN12::SPCS3	0.048	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7788.01A	CLEC12A::CLEC2A	0.05	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A8FS.01A	CLPX::IGDCC4	1.1	tier2	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E7.01A	CLSTN1::ANXA1	5.0	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7080.01A	CLSTN1::IFFO2	1.2	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9ZR.01A	CLTC::ETV4	2.3	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A6G1.01A	CLUAP1::NAA60	0.54	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7818.01A	CMTM4::KLHL24	1.1	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5751.01A	CMTM8::STT3B	2.1	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5521.01A	CNN1::CCT5	0.72	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7327.01A	CNN1::FAM129B	0.22	tier3	3UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.XQ.A8TB.01A	CNST::SMYD3	3.4	tier3	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	CNTNAP2::GSTK1	5.1	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.FC.A4JI.01A	COBLL1::FIGN	0.92	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5510.01A	COG5::CCDC122	0.02	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7817.01B	COG5::TBC1D30	1.4	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8260.01A	COG6::DNAJC15	1.7	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5503.01A	COL2A1::ZNF609	0.45	tier3	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A8IH.01A	COL6A2::FOXP1	0.88	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.AATZ.01A	CORO2A::KBTBD4	0.051	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5524.01A	CORO7::CLEC16A	0.071	tier1	In-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.YL.A8HL.01A	CORO7::GFOD2	0.26	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.J4.A67T.01A	CPD::HDAC5	0.5	tier2	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.CH.5740.01A	CPD::PIGW	0.73	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.XK.AAJA.01A	CPEB2::LDB2	0.64	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SL.01B	CR1L::C1orf116	1.2	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.M7.A720.01A	CREB1::SUCNR1	4.8	tier4	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5527.01A	CRY1::HPSE2	0.27	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7315.01A	CSDA::MRPL42	0.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.XQ.A8TA.01A	CSDA::TMEM8A	0.24	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46F.01A	CSGALNACT1::TMEM150A	0.27	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WY.01A	CSPP1::CPA6	1.0	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9ZR.01A	CTNNA1::COTL1	0.071	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.G9.6332.01A	CTNNA3::SGMS1	1.5	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9LN.01A	CTNNAL1::EPB41L4B	0.15	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SH.01B	CTNND1::DTX4	0.38	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9ZK.01A	CUL2::CYP2C18	0.009	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.FC.A4JI.01A	CUL5::OPCML	1.6	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9L1.01A	CUX1::YEATS2	0.26	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.VP.A872.01A	CUX2::CABP1	0.037	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.CH.5792.01A	CXADR::APP	0.23	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.ZG.A9M4.01A	CXADR::HERC1	0.28	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6353.01A	CYB561::SQSTM1	1.2	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7210.01A	CYB561::XBP1	0.059	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A8QY.01A	CYB561D2::ERC2	0.33	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SP.01B	CYB5R4::FNDC1	1.8	tier2	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.7330.01A	CYB5R4::UBE2CBP	0.53	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A87D.01A	CYLD::FAM49B	0.19	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.8468.01A	CYP39A1::FGGY	1.9	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A76W.01A	DAP::RGL2	0.95	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.XK.AAJA.01A	DARS::MGAT5	2.4	tier2	In-frame	A1 : B1	A1 : B0	NA
PRAD	TCGA.HC.7210.01A	DARS::THSD7B	0.51	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6494.01A	DCAF5::MYO1D	0.09	tier4	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7818.01A	DCAF5::PTK2B	1.0	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.G9.A9S0.01A	DCAF6::MPZL1	0.6	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.7321.01A	DDX10::ARNTL	0.056	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.7782.01A	DDX17::ARFGEF2	0.43	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.M7.A720.01A	DDX23::NMNAT2	0.57	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5792.01A	DDX47::CREBL2	0.02	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7785.01A	DENND4C::RHOBTB2	0.4	tier4	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A6AN.01A	DHCR24::C9orf102	0.2	tier1	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.KC.A7FA.01A	DHCR24::LRP11	0.14	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A872.01A	DHCR24::PRKCSH	0.34	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7781.01A	DHRS4::MANBA	100.0	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6339.01A	DHX15::ETV1	0.72	tier1	In-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	DHX30::LIMD1	0.14	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A67K.01A	DHX30::ZDHHC3	1.6	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.CH.5768.01A	DHX8::MYO18A	0.33	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.A631.01A	DHX9::FBXO7	0.095	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.TK.A8OK.01A	DHX9::PRELID1	0.19	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.7522.01A	DHX9::RASAL2	0.011	tier1	5UTR-CDS	A0 : B1	A0 : B0	non-validated
PRAD	TCGA.V1.A9Z7.01A	DIAPH2::MAGEA11	2.2	tier2	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A48F.01A	DIP2C::INPP5A	0.83	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A7NH.01A	DIRC2::DDT	0.35	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.A9S7.01A	DIS3L2::DNM1	0.51	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.VN.A88L.01A	DLD::SCEL	0.95	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A59X.01A	DLG1::CRYBG3	0.25	tier1	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.YL.A8S8.01A	DLG2::CARD17	0.13	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A67L.01A	DLGAP1::XRCC6BP1	0.95	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O5.06A	DMWD::KDM4C	0.013	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7325.01B	DNAJC7::SCGB2A2	1.2	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.TP.A8TT.01A	DOCK1::GANC	1.1	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9L5.01A	DOCK3::SLC9A5	0.33	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A8QZ.01A	DOCK4::IMMP2L	0.12	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5525.01A	DOPEY2::ELF2	0.006	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O9.01A	DOT1L::LSM7	0.47	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.A9TE.01A	DROSHA::UGT3A2	0.13	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7AU.01A	DSTN::DTD1	1.2	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.8469.01A	DTD1::KIF16B	3.1	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5752.01A	DTL::INTS7	0.72	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.QU.A6IO.01A	DUSP1::MFN1	1.3	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.7525.01A	DUSP16::LOH12CR1	0.021	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A65E.01A	DUSP22::PTK7	0.33	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.XJ.A9DX.01A	DYM::ACAA2	0.68	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5521.01A	DYM::C10orf105	0.48	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8WS.01A	DYM::KATNAL2	0.082	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	DYNC1H1::EVL	0.54	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6354.01A	DYNC1LI1::MRPS11	0.58	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A8QZ.01A	DYNLT1::DUSP15	0.62	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.XK.AAJA.01A	DYRK1A::KCNJ6	0.58	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A65J.01A	EAF1::CAND2	0.76	tier1	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.HC.7233.01A	EBPL::MIPEP	100.0	tier1	In-frame	A0 : B0	A0 : B0	non-validated
PRAD	TCGA.V1.A8WS.01A	ECI1::CDKN3	100.0	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8I6.01A	EDEM1::GPD1L	0.021	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5518.01A	EDEM3::HHAT	3.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5516.01A	EEA1::UBL3	0.13	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J9.A8CN.01A	EFCAB8::TNNC2	0.11	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7209.01A	EFTUD2::DUSP3	0.18	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.J4.A67M.01A	EFTUD2::SIN3A	0.29	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7314.01A	EGR1::PLAT	0.3	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WK.01A	EHD1::BATF2	1.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	EHMT1::GRIN1	0.27	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8WV.01A	EIF2AK1::MAP2K5	1.3	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.XK.AAIV.01A	EIF4ENIF1::C22orf24	0.16	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.7213.01A	ELAC2::COX10	0.031	tier1	In-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.YL.A8HM.01A	ELAVL2::CFTR	0.068	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8265.01B	ELK4::SLC26A9	0.012	tier2	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9LY.01A	ELK4::VCL	0.58	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A7NN.01A	ELK4::ZNF350	3.0	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7736.01A	ENOX2::SMARCA1	0.18	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7077.01A	EP300::FAM55B	0.78	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.2A.AAYU.01A	EP400NL::ATF7IP	0.6	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A59X.01A	EPHA6::CNTN6	0.64	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.KK.A5A1.01A	EPN2::SLC5A10	1.3	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.AATZ.01A	EPN3::SEMA4G	0.17	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	EPS15L1::CPAMD8	0.65	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E4.01A	ERBB3::FOXA1	0.6	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.XQ.A8TB.01A	ERG::ABCC4	1.0	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E1.01A	ERG::KCNJ6	0.13	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.CH.5739.01A	ERG::PLEKHH1	0.096	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.7230.01A	ERG::SON	0.45	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.EJ.7797.01A	ERG::TAF8	1.2	tier1	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.J4.A67S.01A	ERG::TMPRSS2	2.0	tier2	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8WS.01A	ERG::TMPRSS2	2.0	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.J4.A83I.01A	ERG::ZNRF3	0.1	tier3	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.YL.A9WJ.01A	ERLIN1::HPSE2	1.6	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8259.01A	ETF1::C5orf44	0.13	tier4	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.G9.7510.01A	ETV3::MNDA	1.1	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8I9.01A	ETV6::DUSP16	0.98	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.J4.AATZ.01A	ETV6::PDE6H	100.0	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.8265.01A	EXOC5::SLC35F4	0.012	tier2	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7123.01A	EXT1::SAMD12	0.75	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A5A1.01A	EYA2::SYS1	0.28	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SR.01B	EYS::BAI3	0.054	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.XQ.A8TA.01A	EZH1::IGFBP5	0.085	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9KY.01A	FAF1::TTC39A	3.4	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.XJ.A9DX.01A	FAM108B1::CCL25	1.1	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5526.01A	FAM110B::DIABLO	1.1	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9OL.01A	FAM110B::PREX2	0.38	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WL.01A	FAM116A::FHIT	0.94	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8265.01A	FAM129B::CLDN4	0.17	tier2	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.XQ.A8TA.01A	FAM134B::TPPP	0.17	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5740.01A	FAM13B::CDC25C	0.41	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.8474.01A	FAM13C::S100P	1.9	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	FAM160B1::VTI1A	0.86	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.G9.A9S4.01A	FAM162A::CSTA	0.025	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.XK.AAIV.01A	FAM168B::ANKRD42	0.77	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8S8.01A	FAM171B::KYNU	0.11	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7218.01B	FAM188B::C7orf10	0.17	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	FAM190A::AFF1	0.046	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A65J.01A	FAM190A::MMRN1	1.1	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.TP.A8TT.01A	FAM190A::WDFY3	0.85	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A8QZ.01A	FAM193A::TBC1D10C	0.29	tier2	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8WL.01A	FAM38A::MNS1	2.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6377.01A	FAM38A::TMEM219	0.023	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	FAM49A::RAD51AP2	0.62	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6356.01A	FAM59A::NEDD4L	0.61	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7792.01A	FAM73A::PIGU	1.1	tier3	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.XQ.A8TA.01A	FANCC::ROR2	0.67	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7745.01A	FAR1::AP000769.1	0.49	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	FARS2::RIPK1	0.27	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8WV.01A	FBXL3::MYCBP2	1.9	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.M7.A724.01A	FBXL5::RAB28	0.22	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A87D.01A	FBXO11::INTS9	0.4	tier1	Out-of-frame	A0 : B0	A0 : B1	NA
PRAD	TCGA.J4.A83M.01A	FBXO18::FRMD4A	0.9	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8WL.01A	FBXO34::ATG7	0.014	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	FCHSD2::C2CD3	0.096	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.J4.A67Q.01A	FDPS::IPO9	2.1	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.XK.AAJ3.01A	FGD4::MRPS35	1.9	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A7NM.01A	FGFR3::AES	0.076	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A65B.01A	FIP1L1::SLC38A8	0.41	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A7NN.01A	FLYWCH2::SLC37A3	1.5	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.H9.7775.01A	FMOD::ARFGEF2	1.0	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6384.01A	FMOD::THSD4	0.007	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9KY.01A	FNDC3B::TMEM212	0.53	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	FNIP2::LRAT	1.2	tier2	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A8CY.01A	FNIP2::SLC35A3	0.39	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8MG.01A	FOXN3::KCNQ1	0.87	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J9.A8CK.01A	FOXP1::ACTR3B	2.0	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A83N.01A	FOXP1::COQ10B	2.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SA.01A	FOXP1::HRH1	1.2	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.VP.A87K.01A	FOXP1::UGGT1	0.8	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9ZK.01A	FOXP2::ENKUR	0.024	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8ID.01A	FOXP4::DNAH8	0.25	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A65J.01A	FRA10AC1::PDE6C	0.03	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5794.01A	FRAS1::MRPL1	0.19	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.8265.01A	FRS2::RASSF3	0.07	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	FRYL::OCIAD2	0.48	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	FRYL::OCIAD2	0.48	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SF.01A	FUBP1::DNAJB4	0.27	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.KK.A7AY.01A	FUK::ABCB5	0.067	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A83I.01A	FUT10::C8orf42	1.6	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KC.A7FD.01A	FXR2::TARBP1	6.6	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.G9.6364.01A	FYTTD1::IFIT1	0.36	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5766.01A	FZD4::RP11-115C10.1	0.36	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.XJ.A9DX.01A	FZR1::CELF5	0.053	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6348.01A	GABPB1::CSNK1G3	0.48	tier3	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5761.01A	GABPB1::SPATA5L1	0.28	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9KY.01A	GABRB3::TJP1	0.48	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WL.01A	GAK::MEX3D	0.45	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.XK.AAJA.01A	GALNT14::NRXN1	0.21	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9Z8.01A	GALNT3::TTC21B	0.22	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.AA1N.01A	GALNT7::CEP44	0.057	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.VN.A943.01A	GALNT7::GAB1	0.35	tier1	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.EJ.7123.01A	GALNT7::SPCS3	0.058	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7AV.01A	GALNT7::TTC29	1.2	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.2A.A8W3.01A	GATAD2B::KCNN3	0.23	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8265.01A	GATAD2B::KCNN3	0.23	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SR.01B	GATAD2B::LELP1	0.039	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7AU.01A	GBAS::PHYHIPL	3.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.M7.A71Y.01A	GDAP2::SLAIN1	0.28	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9N3.01A	GDE1::TIAL1	0.24	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.J4.AATZ.01A	GGT1::PRODH	0.28	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7B4.01A	GIGYF2::TMEM163	0.53	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7B1.01A	GLB1::PSD2	0.01	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.TP.A8TV.01A	GLI3::VSTM2A	0.29	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.A6AP.01A	GLO1::KIF6	0.64	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A7NF.01A	GMDS::BCAS3	0.064	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6353.01A	GMDS::CCND3	0.012	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6496.01A	GNAS::FN1	1.2	tier3	3UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.A8FP.01A	GNG12::DIRAS3	0.088	tier3	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7781.01A	GNG4::SH3D19	0.28	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5499.01A	GNPAT::PCNXL2	0.64	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7327.01A	GNPDA1::RNGTT	5.7	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	GOLGA4::MLH1	0.063	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A65F.01A	GOLGB1::GK5	0.003	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5496.01A	GOLPH3::SLC6A19	1.7	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.AATZ.01A	GON4L::MTX1	0.45	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.TK.A8OK.01A	GPATCH8::COMTD1	0.29	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6356.01A	GPATCH8::KRT25	0.41	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7327.01A	GPBP1::MTRR	0.15	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5788.01A	GPBP1L1::ZMPSTE24	0.41	tier3	In-frame	A0 : B1	A0 : B1	non-validated
PRAD	TCGA.HC.A76W.01A	GPC6::GPC5	3.3	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7232.01A	GPHN::SLC8A3	0.066	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7209.01A	GPLD1::BANK1	0.44	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.J9.A8CL.01A	GPR107::GARNL3	1.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A876.01A	GPR160::PDCD10	0.52	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5766.01A	GPRC5C::CLDN4	0.44	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8MF.01A	GREB1::PDE1A	1.5	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9OT.01A	GRHL2::ERG	0.27	tier2	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.YL.A8SP.01B	GRHL2::NCALD	0.2	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5766.01A	GRINA::MUC6	0.56	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8IH.01A	GSK3A::ZNF564	1.3	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6333.01A	GSK3B::ATP11B	0.17	tier4	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.A4ZV.01A	GSK3B::LSAMP	0.14	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.XK.AAJA.01A	GSK3B::PLA1A	0.49	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9KY.01A	GSK3B::SEMA5B	0.38	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.FC.A4JI.01A	GSK3B::TSC22D2	0.009	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7794.01A	GSN::TRA2A	0.2	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7AV.01A	GSR::STMN2	0.07	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.Y6.A9XI.01A	GTF2B::ODF2L	0.95	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.VP.A87D.01A	GTF2E2::FBXO16	0.024	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7081.01A	GTF2E2::HEATR4	0.77	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KC.A4BR.01A	GUCA2A::ERG	0.35	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.V1.A9OY.01A	GULP1::KCNJ13	0.002	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.J4.A83J.01A	GULP1::NCKAP1	0.38	tier1	5UTR-CDS	A0 : B1	A0 : B1	NA
PRAD	TCGA.VP.A87J.01A	H2AFV::CDC45	3.4	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7784.01A	H6PD::CRISP3	0.2	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8HL.01A	HAUS8::SGTA	1.4	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.H9.7775.01A	HBP1::ATXN7L1	0.16	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.7794.01A	HBS1L::IL9	0.15	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.V1.A8WV.01A	HDAC10::MORN5	100.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.7523.01A	HDAC8::PHKA1	0.51	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7210.01A	HDLBP::CLASP2	0.48	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5503.01A	HDLBP::DDX27	0.049	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7218.01B	HDLBP::DSP	0.64	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	HDLBP::NSRP1	0.58	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.7328.01A	HDLBP::SMARCE1	1.3	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7077.01A	HDLBP::SPON2	0.12	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SB.01A	HDLBP::STAT6	0.26	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A631.01A	HDLBP::TMC1	0.73	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9L5.01A	HEATR7A::PKMYT1	0.12	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.YL.A9WH.01A	HERC1::SNX6	0.53	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5516.01A	HGD::CACNA1D	0.045	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.VN.A88L.01A	HHAT::KIF5B	2.7	tier1	In-frame	A0 : B1	A0 : B1	NA
PRAD	TCGA.VN.A88L.01A	HIPK2::MYCBP2	0.19	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6371.01A	HIST2H2BE::NDUFV1	100.0	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.8469.01A	HK1::CTNNA3	1.6	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5514.01A	HKR1::FECH	1.4	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6371.01A	HLA-C::DDX21	0.95	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5761.01A	HLA-C::FADS2	0.73	tier4	3UTR-CDS	A0 : B0	A0 : B1	NA
PRAD	TCGA.HC.7748.01A	HNRNPA2B1::CANT1	0.46	tier4	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7820.01A	HNRNPD::C4orf22	100.0	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7321.01A	HNRNPUL1::ATG10	0.45	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5518.01A	HNRNPUL1::SLC8A2	2.7	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A5A1.01A	HOMER2::AC024270.1	0.011	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.XK.AAIV.01A	HSF1::MICALL1	0.1	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.G9.6371.01A	HSPA1B::MYLK	0.021	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.XA.A8JR.01A	HSPB1::CAMKK2	0.051	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9OL.01A	HTT::WDR19	0.18	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7314.01A	IDE::CAMK1D	0.49	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A875.01A	IFNGR1::SMCHD1	0.66	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.A9S4.01A	IFT122::PITPNB	0.035	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	IFT43::RBM25	0.46	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8ID.01A	IFT81::ACACB	3.6	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5512.01A	IKZF2::EFHA1	0.18	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J9.A8CL.01A	IL13RA1::DOCK11	0.96	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7782.01A	IL1RAPL2::STK39	0.12	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9L2.01A	IL6ST::DDX4	0.27	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WL.01A	IL6ST::LAMC2	0.47	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A5A1.01A	ILF3::ZNF177	1.8	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	IMMP2L::DOCK4	0.12	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.TP.A8TV.01A	IMPA1::RSPO2	0.3	tier4	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7077.01A	INADL::PDE4B	1.4	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5516.01A	ING2::IDH1	0.36	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5497.01A	INTS1::GET4	0.096	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5752.01A	INTS7::DTL	0.72	tier1	In-frame	A1 : B1	A1 : B0	NA
PRAD	TCGA.ZG.A9L2.01A	IP6K1::HYAL3	0.088	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A87D.01A	IPO8::KRT86	0.1	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.J4.AATZ.01A	IREB2::CTSH	1.7	tier1	In-frame	A0 : B0	A1 : B0	NA
PRAD	TCGA.EJ.7783.01A	IREB2::LEO1	0.49	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7752.01A	ITCH::PIGU	4.5	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9L4.01A	ITFG1::SLC45A2	1.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E5.01A	ITGA6::MYO3B	0.11	tier2	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.VN.A88P.01A	ITGA9::HMOX2	0.15	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6371.01A	ITM2B::CBS	0.6	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7788.01A	ITPR2::CLEC2A	1.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.AATZ.01A	JHDM1D::AGK	0.36	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5737.01A	JHDM1D::BRAF	0.23	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A83I.01A	JMJD1C::ANK3	1.3	tier2	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.HC.7738.01A	JTB::CYP1B1	100.0	tier4	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7AW.01A	KAT6A::TRAPPC9	0.42	tier2	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.Y6.A9XI.01A	KAT6A::VDAC3	0.039	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8HL.01A	KAT6B::CORO7	0.3	tier1	Out-of-frame	A0 : B1	A0 : B1	NA
PRAD	TCGA.VP.A875.01A	KAT6B::SH3BP5L	0.33	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.A76X.01A	KCMF1::GGCX	1.4	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.7209.01A	KCNMA1::FARP1	0.008	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.J4.A83I.01A	KCNMB4::RTKN2	3.9	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8MG.01A	KCTD20::STK38	0.72	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A8ID.01A	KCTD7::KLK3	0.094	tier4	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	KDM2A::C11orf80	0.54	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.8266.01A	KDM2B::SLC9A5	0.2	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.8265.01A	KDM4B::AC011498.1	0.13	tier4	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.A9S7.01A	KDM4B::ASTN2	0.27	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7AQ.01A	KDM4C::PTPRD	0.48	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.8469.01A	KDM6A::ARHGAP6	0.089	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.FC.A4JI.01A	KIAA0146::SLA	1.7	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7330.01A	KIAA0146::TG	4.2	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SC.01A	KIAA0317::CELA3B	0.67	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5510.01A	KIAA0564::COG5	0.4	tier4	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9ND.01A	KIAA0825::GPR98	0.29	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.7521.01A	KIAA0825::MCTP1	0.28	tier4	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	KIAA0922::ARFIP1	0.61	tier3	Out-of-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.XJ.A9DX.01A	KIAA1199::KATNAL2	0.22	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9ZR.01A	KIAA1244::HMHA1	0.053	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O9.01A	KIAA1267::NSF	2.6	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8ID.01A	KIAA1310::TSGA10	2.5	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5511.01A	KIAA1430::AADAT	0.032	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.8469.01A	KIAA1598::C20orf12	0.012	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6361.01A	KIAA1704::MEF2A	0.23	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.J9.A8CM.01A	KIAA1797::C10orf90	2.8	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.J9.A8CP.01A	KIAA1797::PDZRN4	0.74	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O5.06A	KIAA2022::CXorf26	1.7	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.XJ.A9DX.01A	KIF13A::TPMT	0.78	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O9.01A	KIF13B::CSGALNACT1	0.11	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8I6.01A	KIF13B::PNOC	0.37	tier4	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.8216.01A	KIF18B::TUBG1	0.058	tier1	5UTR-CDS	A0 : B1	A0 : B1	NA
PRAD	TCGA.J4.A67K.01A	KIF1C::NDEL1	0.19	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.J9.A52D.01A	KIF2A::RNF180	0.59	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.VN.A88L.01A	KIF5B::HHAT	2.7	tier1	In-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.J4.A83J.01A	KIF5C::TTN	0.014	tier2	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.A9S7.01A	KLHDC4::MAF	1.5	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.7230.01A	KLK2::CCT5	0.38	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9LY.01A	KLK2::ETV1	0.057	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O5.01A	KLK2::FGFR2	1.7	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.V1.A9O5.06A	KLK2::FGFR2	1.7	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5753.01A	KLK2::NDUFV1	2.0	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7793.01A	KLK2::NDUFV1	2.0	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5526.01A	KLK2::PLAT	0.023	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7782.01A	KLK2::STAT6	1.4	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.QU.A6IP.01A	KLK2::ZNFX1	0.018	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8256.01A	KLK4::ZNF827	0.029	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7321.01A	KLRAQ1::DNAH6	0.12	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7AU.01A	KPNA1::SMC1B	0.29	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.G9.6329.01A	LAMA3::COX8C	0.68	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.TK.A8OK.01A	LAMC3::NPHP3	4.0	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A875.01A	LAPTM4A::NMD3	0.67	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8HO.01A	LARP4::HPD	1.5	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.7233.01A	LARS2::SEC22A	0.2	tier3	In-frame	A0 : B0	A0 : B0	non-validated
PRAD	TCGA.EJ.5524.01A	LCOR::C10orf131	0.2	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7783.01A	LEO1::FBN1	0.075	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7793.01A	LIMCH1::DNM1L	1.2	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	LIMCH1::UCHL1	0.3	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8IC.01A	LLGL2::CPNE4	0.69	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A8FU.01A	LMBR1::PTPRN2	0.83	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7B1.01A	LMCD1::ZNF589	0.77	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.XK.AAJ3.01A	LNPEP::PPIP5K2	0.77	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8WS.01A	LOH12CR1::HDAC7	0.085	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	LPHN2::AK5	0.072	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.J4.AATZ.01A	LPP::LIPJ	0.96	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.VN.A88N.01A	LRBA::HFE2	0.22	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8ID.01A	LRIG1::SUCLG2	1.5	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.SU.A7E7.01A	LRP1::KLK3	1.0	tier4	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.XJ.A9DX.01A	LRRC16A::CDKAL1	2.2	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8265.01B	LRRC58::FSTL1	0.14	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A65D.01A	LRRC58::LSAMP	0.14	tier4	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8257.01A	LRRC7::RRP15	0.15	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5765.01A	LRRCC1::FAM164A	0.71	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O5.06A	LSM14A::TDRD12	0.52	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5496.01A	LTBP1::BIRC6	0.084	tier1	In-frame	A1 : B1	A0 : B1	NA
PRAD	TCGA.G9.6356.01A	LTF::C7	0.45	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7079.01A	LTF::CFB	1.4	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.H9.A6BX.01A	LTF::SEC63	2.4	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5745.01A	LUC7L2::ETV1	0.64	tier1	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5510.01A	LUC7L2::ETV1	0.64	tier4	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	LUC7L2::MRPS33	0.28	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7782.01A	LYPD6B::LRBA	2.0	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.J9.A52C.01A	LYSMD1::MFSD4	0.36	tier4	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SB.01A	MAF1::TMEM205	0.28	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7745.01A	MAGED2::SCAMP4	2.4	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9KY.01A	MAGI1::SUCLG2	1.4	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8II.01A	MAGI1::TBC1D30	0.1	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.8266.01A	MAK::INTS12	3.4	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.2A.A8VV.01A	MAML3::SCOC	1.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8MM.01A	MAN2A1::DIRC1	0.17	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5761.01A	MAN2C1::MESP2	0.64	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6348.01A	MAP1B::SLC27A2	1.0	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	MAP2K5::IQCH	1.2	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9LM.01A	MAP3K10::ALDH16A1	0.38	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8264.01B	MAP3K12::GDF11	0.038	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A875.01A	MAP3K5::CLVS2	0.046	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SQ.01B	MAP3K6::KLK3	0.29	tier4	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8265.01A	MAP4::MON1A	0.23	tier2	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A8IL.01A	MAP4K3::TMEM178	0.021	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A632.01A	MAP7::MAP3K5	0.71	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8ID.01A	MAPK10::FAM13A	0.02	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.A65J.01A	MAPK6::TMOD3	0.7	tier3	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8265.01A	MAPK8IP3::TELO2	0.19	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7789.01A	MAPK9::DGKB	1.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J9.A8CN.01A	MAPRE1::TM9SF4	0.003	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7785.01A	MAPRE1::USP28	0.12	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.FC.A5OB.01A	MAST2::COQ6	1.5	tier3	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9KY.01A	MAST2::ST3GAL3	0.5	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5515.01A	MATR3::KDM3B	1.3	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6338.01A	MB::TRDN	0.7	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WL.01A	MBD3::GAK	0.12	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7792.01A	MBNL1::NMNAT3	2.0	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A7NM.01A	MBOAT2::BRAT1	2.8	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8IC.01A	MBTD1::SYBU	0.66	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.7782.01A	MCART6::IL1RAPL2	0.19	tier2	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.8265.01A	MCL1::AR	0.4	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	MED13L::TAOK3	0.035	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7B1.01A	MED15::C14orf118	0.024	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5518.01A	MEF2D::APOA2	0.002	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5771.01A	METTL13::EIF4G3	0.21	tier1	In-frame	A0 : B0	A0 : B0	non-validated
PRAD	TCGA.J4.A83I.01A	MGA::SCD	2.3	tier2	Out-of-frame	A1 : B1	A0 : B1	NA
PRAD	TCGA.EJ.7315.01A	MICAL3::ATAD1	0.79	tier2	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7793.01A	MICALCL::MICAL2	0.42	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9LZ.01A	MIER3::ABCC12	0.96	tier1	CDS-3UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SB.01A	MINK1::AC063977.1	0.07	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.7744.01A	MINPP1::LIPJ	0.44	tier1	Out-of-frame	A0 : B0	A0 : B0	validated
PRAD	TCGA.EJ.5497.01A	MIPEP::TNFRSF19	1.2	tier4	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.YL.A9WK.01A	MIPOL1::KIAA0391	0.055	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.8472.01A	MKL1::TMEM218	0.34	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8I7.01A	MKL2::SCNN1B	0.23	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.HC.7821.01A	MKLN1::AMTN	0.41	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SP.01B	MLL3::FUT9	0.14	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.2A.A8VT.01A	MLL3::NDUFAF4	0.12	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A7NF.01A	MLLT4::EXOC6B	1.6	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9OY.01A	MLLT4::SYK	1.4	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5524.01A	MLYCD::MGRN1	0.5	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8WN.01A	MMP11::GAS2L1	0.96	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.XJ.A9DX.01A	MMP15::CCDC135	0.011	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A67L.01A	MMP26::GUCY2F	1.9	tier4	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E1.01A	MNAT1::RASGEF1B	0.59	tier2	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.CH.5745.01A	MON1A::C21orf67	0.21	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.XJ.A9DQ.01A	MOV10::ZNHIT6	0.25	tier1	In-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.KK.A8IA.01A	MPDU1::CTDNEP1	1.4	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.FC.7708.01A	MPDU1::GLP2R	0.021	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A9TH.01A	MPND::RABEP1	1.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	MPP5::GPHN	0.24	tier3	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A8IC.01A	MRC2::PHYHIPL	0.063	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KC.A7FD.01A	MRPL39::SLC35G6	0.28	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8HK.01A	MRPL40::TMCC3	1.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8266.01A	MRPL42::ZMIZ1	2.9	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.WW.A8ZI.01A	MRPL44::ABCG1	0.22	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5516.01A	MRPS27::HIST1H2BN	0.02	tier1	CDS-3UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.CH.5788.01A	MRPS5::NEB	0.44	tier2	Out-of-frame	A0 : B1	A0 : B0	non-validated
PRAD	TCGA.KK.A5A1.01A	MSH2::TTC7A	0.19	tier3	In-frame	A1 : B1	A1 : B0	NA
PRAD	TCGA.EJ.5507.01A	MSI2::C18orf34	3.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.TP.A8TT.01A	MSI2::SMYD3	100.0	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8260.01A	MSMB::ANXA1	100.0	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A67O.01A	MSMB::KLK3	0.13	tier1	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.J9.A52B.01A	MSMB::KLK3	0.13	tier1	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8262.01A	MSMB::SUPT16H	100.0	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7080.01A	MSRA::AGPAT5	0.78	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5741.01A	MSRA::ESCO2	0.83	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9L0.01A	MTMR2::TCP11L1	0.14	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8260.01A	MTRR::SLC30A5	0.51	tier4	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7742.01A	MXI1::KLK3	2.9	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7752.01A	MYBPC1::NPY	100.0	tier4	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9LZ.01A	MYCBP2::TAF6L	0.093	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.VP.A879.01A	MYH11::TYK2	0.025	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SB.01A	MYH11::ZNF827	0.53	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8IA.01A	MYH3::CYP3A5	0.058	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6371.01A	MYH9::DDX21	0.36	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8WN.01A	MYH9::KLK3	0.51	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5525.01A	MYO15B::IGSF5	2.4	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7211.01A	MYO1B::ABCC4	0.087	tier3	In-frame	A0 : B1	A0 : B1	NA
PRAD	TCGA.G9.6499.01A	MYO1B::SPAG16	0.41	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.ZG.A9L5.01A	MYO1E::C9orf3	1.7	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.8262.01A	MYO6::NEGR1	0.15	tier4	In-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.KK.A5A1.01A	MYRIP::MLH1	0.14	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9OQ.01A	NAA15::HHIP	2.2	tier1	Out-of-frame	A0 : B0	A1 : B0	NA
PRAD	TCGA.HC.7230.01A	NAA25::WSCD2	3.5	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7317.01A	NAA50::CD47	0.18	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5530.01A	NAA60::KIAA0174	0.87	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8S8.01A	NAALADL2::NLGN1	0.42	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7792.01A	NAALADL2::RSRC1	1.5	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.FC.A4JI.01A	NAP1L4::ATP11B	0.054	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.2A.A8VL.01A	NASP::PIK3R3	0.64	tier2	In-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.CH.5753.01A	NBEA::POSTN	0.031	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SC.01A	NBR1::C17orf104	0.22	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5512.01A	NCAM2::CRYL1	1.6	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A83J.01A	NCKAP1::LYPD6B	0.97	tier1	CDS-5UTR	A1 : B0	A1 : B0	NA
PRAD	TCGA.KK.A59X.01A	NCKAP5::MZT2A	0.58	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7123.01A	NCL::STAT6	0.58	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.FC.A4JI.01A	NCOA2::EIF4EBP1	1.1	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.XK.AAIV.01A	NCOA2::SGSM3	2.9	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8ML.01A	NCOA4::ARHGAP44	0.16	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5497.01A	NCOA4::C10orf25	0.41	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.Y6.A9XI.01A	NCOA4::SRSF7	4.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.V1.A9ZI.01A	NCOR1::TFDP2	3.0	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7213.01A	NCSTN::SREBF1	0.46	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A67K.01A	NDEL1::DHX30	0.1	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7736.01A	NDRG1::CLCN3	0.9	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5498.01A	NDRG1::DACT3	1.4	tier1	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.XK.AAIV.01A	NDRG1::MYC	3.8	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7077.01A	NDRG1::RABEP1	2.5	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5527.01A	NDUFS3::ERO1LB	0.71	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8IL.01A	NEDD4L::MORC3	1.3	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.8470.01A	NEDD4L::ZC3H7A	0.008	tier1	CDS-5UTR	A1 : B0	A1 : B0	NA
PRAD	TCGA.EJ.A8FS.01A	NEK7::CD1C	4.5	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	NEMF::METTL21D	0.09	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9ND.01A	NEO1::NR2E3	1.8	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.CH.5752.01A	NET1::ACSM3	1.1	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.2A.A8W1.01A	NF1::BRCA1	0.27	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7209.01A	NFAT5::TCF7L2	0.17	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.M7.A724.01A	NFATC3::C16orf55	0.49	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E2.01A	NFIA::CLCA1	0.32	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5740.01A	NFIA::CYP2J2	0.64	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A8QY.01A	NFIC::CELF5	0.43	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5506.01A	NFIX::ANXA1	0.45	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A4ZV.01A	NFIX::CAPN12	0.004	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6377.01A	NFKB1::LHFPL3	1.6	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.G9.6351.01A	NINL::NAA20	0.081	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5519.01A	NKX3-1::SEC63	0.21	tier2	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5518.01A	NME7::ASH1L	0.057	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A87D.01A	NME7::KMO	0.31	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KC.A7FA.01A	NPAS2::GNLY	1.5	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5524.01A	NPC1::OSBPL1A	0.71	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6333.01A	NPY::DDX21	0.41	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6354.01A	NPY::FOXP1	100.0	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7B4.01A	NRF1::MLXIPL	0.41	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.YL.A8HL.01A	NRF1::PPP2R5A	1.4	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.FC.A4JI.01A	NRG1::STMN2	3.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.A48F.01A	NRP1::PTEN	0.16	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.KK.A59X.01A	NSF::EED	1.4	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8IB.01A	NSMAF::CLVS1	0.13	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9Z7.01A	NSMCE2::RP11-785H20.1	100.0	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	NSRP1::CDK12	0.21	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7781.01A	NTM::CARD18	0.073	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9Z8.01A	NUDT4::ATAD5	0.089	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7742.01A	NUFIP2::CPD	0.29	tier4	Out-of-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.HC.7821.01A	NUMA1::CRYM	0.38	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5764.01A	NUMA1::FOXP1	0.013	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9ZR.01A	NUP205::DVL2	2.4	tier1	Out-of-frame	A0 : B1	A0 : B1	NA
PRAD	TCGA.V1.A9ZR.01A	NUP85::IL34	0.51	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A87D.01A	OCLN::CDK14	1.2	tier1	CDS-3UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.XQ.A8TA.01A	ODZ1::TMEM170A	0.66	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8IC.01A	OGT::POLA1	3.7	tier1	In-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.J4.A6G1.01A	OLFM4::TOP2B	0.56	tier3	3UTR-CDS	A0 : B1	A0 : B1	NA
PRAD	TCGA.KK.A6E2.01A	OPA1::PIGX	0.71	tier3	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.KC.A7F5.01A	OPN3::SLC39A11	0.9	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8MK.01A	OR51E2::C17orf48	1.4	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A8QZ.01A	ORC5::R3HDM2	3.9	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6371.01A	OS9::HDLBP	2.1	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A83J.01A	OSBPL8::TSPAN8	1.4	tier2	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.CH.5771.01A	OSBPL9::SERINC5	0.92	tier1	Out-of-frame	A1 : B0	A0 : B0	validated
PRAD	TCGA.CH.5771.01A	P4HA1::CTNNA3	1.2	tier4	In-frame	A0 : B0	A0 : B0	non-validated
PRAD	TCGA.EJ.5532.01A	P4HA1::NODAL	0.6	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7125.01A	P4HB::C7	0.003	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6366.01A	P4HB::CCT5	1.2	tier1	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KC.A7F5.01A	P4HB::CTSF	0.053	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7210.01A	P4HB::FAR1	1.9	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7784.01A	P4HB::MYO6	0.065	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5525.01A	P4HB::NDUFV1	0.042	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	P4HB::NDUFV1	0.042	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7782.01A	P4HB::NHP2L1	0.044	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7791.01A	P4HB::NHP2L1	0.044	tier3	NA	A0 : B0	A0 : B0	non-validated
PRAD	TCGA.HC.8256.01A	P4HB::SEC63	0.59	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7AP.01A	P4HB::ZFP91	0.48	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	PAK1::NARS2	1.2	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7327.01A	PANK1::PDK3	0.8	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8256.01A	PAPD7::RAF1	0.13	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7784.01A	PAPOLG::ABCA12	0.16	tier2	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.J4.A83I.01A	PARD3::ADAMTS17	1.3	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.8258.01A	PARD3B::MAP2	0.23	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.CH.5794.01A	PARD3B::TACC1	0.66	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5501.01A	PARP8::EIF5A2	0.41	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.VN.A943.01A	PARP8::ELL2	0.44	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.VP.A875.01A	PARVA::ESRRB	1.5	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6343.01A	PAXIP1::GIMAP2	0.016	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.KK.A5A1.01A	PC::ORAOV1	0.37	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9OT.01A	PCF11::DOCK2	0.48	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A878.01A	PCMTD1::ST18	0.077	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	PCMTD1::ST18	0.077	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7080.01A	PCMTD2::MACROD2	0.056	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WK.01A	PCNP::ATR	0.056	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6364.01A	PCNXL2::CDCA7	2.4	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A59X.01A	PCYT1A::EPHA6	2.8	tier2	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5750.01A	PDE4D::DEPDC1B	0.06	tier1	In-frame	A1 : B0	A0 : B0	non-validated
PRAD	TCGA.EJ.5521.01A	PDE4D::DEPDC1B	0.06	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.KK.A8IM.01A	PDE4D::DEPDC1B	0.06	tier3	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.VN.A88O.01A	PDE4D::DEPDC1B	0.06	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7785.01A	PDE4D::ELOVL7	1.2	tier4	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.G9.6342.01A	PDE4D::ELOVL7	1.2	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.KC.A7FA.01A	PDE4D::ELOVL7	1.2	tier4	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9Z9.01A	PDE4D::ELOVL7	1.2	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A8QY.01A	PDE4D::ERCC8	0.054	tier2	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5497.01A	PDE4D::FGF14	0.29	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A83K.01A	PDE4D::INTS10	0.24	tier4	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.HC.7821.01A	PDE4D::PPAP2A	1.6	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.TK.A8OK.01A	PDE4D::RAB24	4.9	tier2	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8ID.01A	PDE9A::SLC37A1	0.27	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9L2.01A	PDE9A::TMPRSS2	0.83	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.CH.5746.01A	PDIA4::CBX5	0.098	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E6.01A	PDIA4::HACE1	0.003	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7327.01A	PDK3::CADPS	1.3	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8IJ.01A	PDS5B::CRYBB1	3.6	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7077.01A	PDS5B::TBC1D4	0.04	tier4	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.7327.01A	PDXDC1::MMP14	0.52	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A87K.01A	PDZRN3::EIF4E3	0.022	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7B1.01A	PDZRN3::THRB	0.093	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9KY.01A	PEMT::TOP3A	0.14	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.2A.A8W3.01A	PER1::ENOPH1	4.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9L1.01A	PERP::CASK	7.2	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.A8CY.01A	PEX1::RAB34	3.3	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5768.01A	PEX14::HMOX2	0.037	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.2A.AAYU.01A	PGM1::SLC16A12	0.13	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8HM.01A	PHC2::HSP90AA1	0.14	tier1	Out-of-frame	A0 : B1	A0 : B1	NA
PRAD	TCGA.G9.7509.01A	PHF12::LIG3	0.18	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WY.01A	PHF15::SGCD	0.63	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9LZ.01A	PHF21A::ACSL6	0.14	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.XK.AAJR.01A	PHF21B::NOC4L	2.6	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8I4.01A	PHF3::R3HCC1	0.15	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7AP.01A	PHLDB1::RNF121	0.15	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A87J.01A	PI4KA::FAM175A	2.4	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7B1.01A	PIAS1::HMCN2	0.007	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.J9.A8CL.01A	PIAS1::ZNF609	0.9	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7321.01A	PICALM::DDX21	0.61	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7821.01A	PICK1::EIF4ENIF1	3.5	tier1	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.HC.7752.01A	PIGU::MAP1LC3A	1.1	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WY.01A	PIK3R1::MRPL42	0.78	tier2	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9M4.01A	PIK3R3::MYO18A	1.5	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7782.01A	PKHD1::CAGE1	0.16	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6367.01A	PKM2::ACPP	1.0	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7742.01A	PKM2::USP7	0.15	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5527.01A	PLA2G2A::CLCN3	0.8	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7AQ.01A	PLA2G2A::FBLN1	1.2	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6348.01A	PLA2G2A::ITGA6	0.017	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.7525.01A	PLA2G2A::MBTPS1	0.52	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WH.01A	PLA2G2A::PLAT	1.1	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5766.01A	PLA2G2A::TAF15	100.0	tier3	3UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.TK.A8OK.01A	PLB1::CAB39	0.2	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.Y6.A9XI.01A	PLD1::LMBR1	0.084	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O9.01A	PLDN::SCMH1	1.6	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8ID.01A	PLEKHA3::MTX2	0.15	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7785.01A	PLEKHA7::MMP9	0.009	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.8262.01A	PLEKHH2::VSNL1	0.68	tier2	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.8265.01A	PLXNA1::CHCHD6	0.37	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E1.01A	PLXNA1::DZIP1L	0.32	tier3	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.J9.A52B.01A	PLXNB2::P4HTM	0.15	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5762.01A	PMEPA1::ETV4	0.41	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.FC.7708.01A	PMPCB::PRKAR2B	0.33	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A8IJ.01A	POLDIP3::TTLL1	0.72	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9N3.01A	POLR3A::TTC6	0.11	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7817.01B	POLR3B::PDS5B	1.1	tier4	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.TP.A8TV.01A	POU2F1::FMO1	0.32	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5518.01A	POU2F1::RPRD2	0.092	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.ZG.A9LZ.01A	PPA2::SORCS2	0.37	tier1	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.J4.A67N.01A	PPAP2A::ARL15	1.7	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8260.01A	PPAP2A::CDC42SE2	0.86	tier4	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.2A.A8VV.01A	PPAP2A::CNTLN	0.32	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A67N.01A	PPAP2A::MAPK1	2.2	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5522.01A	PPAP2A::MLPH	0.062	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.VN.A88K.01A	PPAP2A::SREK1IP1	0.021	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A65M.01A	PPAPDC1B::TMEM66	0.58	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5498.01A	PPARD::WDR27	0.47	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.XK.AAIV.01A	PPFIA1::INTS4	2.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7115.01A	PPIG::SCN9A	2.2	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.TP.A8TV.01A	PPM1B::MTA3	0.019	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5524.01A	PPM1H::KIAA1467	0.28	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8I6.01A	PPM1H::KIF13B	1.8	tier3	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.XJ.A9DX.01A	PPM1H::WIF1	0.46	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.VN.A88P.01A	PPP1R12A::IMMT	2.1	tier2	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.HC.7748.01A	PPP1R16A::CLDN4	0.12	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7328.01A	PPP2R2A::MTUS1	0.88	tier1	Out-of-frame	A0 : B0	A1 : B0	NA
PRAD	TCGA.CH.5790.01A	PPP3CA::BRD2	0.82	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8266.01A	PPP3CA::INTS12	4.0	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.8266.01A	PPP3CA::PPIL1	3.5	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.VP.A87K.01A	PPP3CA::SEPT11	0.077	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.M7.A721.01A	PPP3R1::WDPCP	0.17	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.8468.01A	PRCP::RAB30	1.1	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	PRKAG2::MLL3	2.0	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9KY.01A	PRKAG2::MLL3	2.0	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.2A.A8VV.01A	PRKAR2A::CACNA1D	0.51	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.XK.AAJA.01A	PRKCE::QPCT	4.2	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8IB.01A	PRKDC::UBE2V2	0.5	tier1	In-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.HC.7081.01A	PRKRA::SEC31A	100.0	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O9.01A	PRPF31::SPRYD4	0.045	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6348.01A	PRR15L::KCNH4	2.3	tier1	5UTR-3UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6348.01A	PRR15L::RAB5C	0.002	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8256.01A	PRRC1::NCALD	0.75	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SH.01B	PRRC1::SPINK6	0.13	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A5A1.01A	PRRC2C::PRRX1	0.45	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.XK.AAJA.01A	PRTG::TCF12	0.74	tier3	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	PRUNE::RAB7A	0.24	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A5A1.01A	PRUNE2::GNA14	0.091	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9L2.01A	PSMG2::SETMAR	0.51	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.AB27.01A	PTAR1::FAM108B1	0.92	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E1.01A	PTBP1::UBE3C	0.18	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.VP.A87J.01A	PTEN::C1orf226	1.3	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5521.01A	PTEN::CTNNA3	0.3	tier2	Out-of-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.YL.A8SA.01A	PTEN::GRID1	1.9	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.A48F.01A	PTEN::NRP1	0.16	tier2	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.A7NJ.01A	PTMS::EIF4G1	0.065	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7078.01A	PTPN23::ICA1L	3.4	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.EJ.5514.01A	PTPRD::C9orf92	0.46	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.XQ.A8TA.01A	PTPRG::FHIT	0.043	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.A9TH.01A	PTPRG::FRMD4B	0.49	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.XQ.A8TB.01A	PTPRJ::PPP2CB	2.0	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5514.01A	PTPRK::ECHDC1	0.57	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6333.01A	PTPRK::ECHDC1	0.57	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.A8CY.01A	PTPRM::MC2R	0.2	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7784.01A	PTTG1IP::CLDN4	0.12	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A6G3.01A	PUM1::GFPT1	0.48	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5527.01A	PUM1::SDCCAG8	0.04	tier1	In-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.CH.5794.01A	PUM2::FAM49A	0.29	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.2A.A8VL.01A	PUM2::FAM54B	0.71	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A631.01A	QKI::ATG5	0.31	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9KY.01A	R3HDM2::ANKRD24	0.17	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.A9S0.01A	RAB11FIP4::ARHGAP23	0.55	tier2	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.M7.A724.01A	RAB3GAP1::ARHGAP15	0.036	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7817.01B	RAB4A::WDR47	0.13	tier4	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8WL.01A	RAB4B::FBXL12	0.26	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5794.01A	RAB7A::CLCN3	1.9	tier2	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8ID.01A	RABEP1::MINK1	0.96	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7821.01A	RABGAP1::NIPSNAP3B	0.089	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.M7.A725.01A	RABGAP1L::KLHL20	0.83	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5524.01A	RAD17::SEC24A	2.5	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5497.01A	RAF1::GXYLT2	4.7	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8256.01A	RAF1::PHC3	2.1	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A8CY.01A	RAI1::PEX1	4.2	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6361.01A	RAI2::PPP2R1B	1.7	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A8D0.01A	RALGAPA1::SLC25A21	0.79	tier3	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9KY.01A	RALGPS2::RASAL2	0.65	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.ZG.A9L5.01A	RANBP3::KLK2	0.099	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8265.01A	RANBP3::MLLT1	0.16	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7748.01A	RAP1GAP::GOLGB1	1.4	tier4	3UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6361.01A	RAP1GDS1::ASTN2	0.051	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7212.01A	RAP1GDS1::SCD5	0.12	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6373.01A	RAPGEF2::C4orf45	0.085	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A8QW.01A	RAPGEF2::RAB3IP	0.69	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5501.01A	RARB::FAM19A4	0.072	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7782.01A	RASA1::CDH12	0.56	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A8QX.01A	RASA1::FAM174A	2.2	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9ZK.01A	RASAL2::AL359075.1	0.58	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5518.01A	RASAL2::NUF2	2.7	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5518.01A	RASAL2::RABGAP1L	0.76	tier1	Out-of-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.HC.7737.01A	RASD1::VPS4A	0.038	tier3	3UTR-CDS	A0 : B1	A0 : B0	non-validated
PRAD	TCGA.KK.A8I6.01A	RASEF::OSTF1	0.91	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7AP.01A	RASGRF1::HOMER2	0.45	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8WL.01A	RASSF3::GYS2	4.7	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5761.01A	RASSF3::PPP3CA	0.58	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.FC.A4JI.01A	RB1CC1::MMP16	0.018	tier2	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8IJ.01A	RB1CC1::PTPN3	0.17	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.VP.A87K.01A	RBM19::CLK2	0.028	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5514.01A	RBM39::WFDC13	0.48	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SR.01B	RBM47::IDO2	1.4	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5527.01A	RBPJ::C16orf46	0.03	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7327.01A	RCOR1::KIT	1.1	tier3	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5790.01A	RCOR3::RPS6KC1	0.83	tier4	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A5A1.01A	RELN::ORC5	0.84	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.7232.01A	REPS2::SMARCA1	1.2	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A87H.01A	REPS2::TXLNG	0.36	tier1	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.XJ.A9DX.01A	REPS2::TXLNG	0.36	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.7522.01A	RERE::OOEP	0.99	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
PRAD	TCGA.2A.A8VT.01A	RERE::ZNF345	0.024	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8ID.01A	REV3L::LAMA4	0.21	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SF.01A	RFWD2::MSH4	0.1	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.XQ.A8TA.01A	RGS3::ABCA1	0.49	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5751.01A	RHBDD1::EFR3A	1.0	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7330.01A	RHOB::ANXA1	0.19	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7784.01A	RLF::GPATCH8	0.13	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.G9.6378.01A	RNF10::FBL	1.9	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9OA.01A	RNF121::VASP	2.6	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.YL.A9WY.01A	RNF126::ARHGAP35	0.043	tier4	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.7209.01A	RNF144B::PPP3CA	0.24	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.M7.A725.01A	RNF170::CRYBB1	0.16	tier4	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KC.A7FD.01A	RNF170::CSMD1	0.14	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A7B1.01A	RNF38::LMOD2	5.3	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7794.01A	RNH1::MYBPC1	1.5	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	ROCK2::NTSR2	0.46	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.G9.7525.01A	RORA::STARD9	0.5	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J9.A8CK.01A	RP11-548K23.11::AS3MT	0.16	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5738.01A	RP11-744N12.3::SLC30A4	0.49	tier1	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.TP.A8TT.01A	RP4-761I2.2::TM6SF1	0.35	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.XQ.A8TA.01A	RPL18::AR	0.39	tier2	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.J9.A8CN.01A	RPL18::SQSTM1	0.41	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.VN.A88I.01A	RPL18::TAGLN	0.3	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.KC.A4BL.01A	RPL37A::NDUFV1	0.61	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.HI.7168.01A	RPL8::ABCF1	0.13	tier3	3UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5512.01A	RPL8::SCARB1	0.4	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O5.06A	RPLP1::TMEFF2	1.2	tier4	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7125.01A	RPLP2::ACPP	100.0	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5789.01A	RPN1::ALDOA	0.7	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5771.01A	RPS5::CALD1	100.0	tier3	NA	A0 : B0	A0 : B0	non-validated
PRAD	TCGA.EJ.7328.01A	RPS6::GNB2L1	100.0	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.H9.A6BY.01A	RPS6::GNB2L1	100.0	tier4	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.XQ.A8TA.01A	RPS6::OAZ1	100.0	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.FC.7961.01A	RPS6KC1::VASH2	0.24	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	RPTOR::GAA	0.022	tier3	In-frame	A1 : B1	A1 : B0	NA
PRAD	TCGA.KK.A8ID.01A	RPTOR::IQCH	0.29	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5524.01A	RPTOR::TMEM105	0.23	tier3	CDS-5UTR	A1 : B0	A1 : B0	NA
PRAD	TCGA.KK.A7B3.01A	RRAS2::FHIT	0.039	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5745.01A	RRBP1::ARFGEF2	0.13	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7736.01A	RRBP1::MACROD2	0.002	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6353.01A	RREB1::GABARAPL1	2.5	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9LU.01A	RREB1::WRAP53	1.3	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5745.01A	RRP1B::C21orf70	0.048	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6339.01A	RYBP::CNTN4	0.25	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8IJ.01A	RYBP::FHIT	0.023	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E1.01A	RYK::KALRN	1.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5532.01A	SAE1::BAX	1.5	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5515.01A	SAFB2::KHSRP	1.3	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7B4.01A	SAMD4A::LRBA	2.4	tier2	Out-of-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	SASH1::C6orf103	0.42	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7784.01A	SAT1::CTTN	0.12	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7785.01A	SATB1::STAC	0.9	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7078.01A	SCAF4::HLCS	0.28	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O9.01A	SCAF8::GREB1	1.5	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.M7.A71Z.01A	SCAF8::SAMD5	0.09	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7AU.01A	SCARB1::SUB1	1.4	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.7212.01A	SCD5::STAP1	0.58	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5788.01A	SCMH1::MACF1	0.019	tier3	In-frame	A0 : B0	A0 : B0	non-validated
PRAD	TCGA.V1.A9O9.01A	SCMH1::SQRDL	0.23	tier4	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9ZG.01A	SCP2::NCAM1	0.22	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7327.01A	SCYL1::TRPM8	0.54	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5519.01A	SCYL3::PDZRN4	0.12	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8ID.01A	SDK1::CHST12	0.78	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.CH.5751.01A	SEC23B::CSRP2BP	0.039	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SA.01A	SEC24A::C10orf11	2.7	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7327.01A	SEC24C::SEPT10	0.5	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A6AP.01A	SEC31A::ANAPC10	1.9	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.AATZ.01A	SEL1L::ANGEL1	0.095	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5788.01A	SEMA3D::RBM28	0.051	tier1	5UTR-CDS	A0 : B1	A0 : B0	non-validated
PRAD	TCGA.ZG.A9KY.01A	SEMA4B::PIAS1	0.033	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.XQ.A8TA.01A	SEMA4D::RGS3	0.93	tier2	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.YL.A9WJ.01A	SENP6::ACACB	2.2	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.7210.01A	SENP6::OOEP	0.82	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.KC.A4BV.01A	SEPT9::CRAT	0.44	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.ZG.A9LN.01A	SEPT9::SEC14L1	0.072	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8WN.01A	SERF2::GPN2	0.1	tier1	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7231.01A	SERINC2::FN1	0.68	tier3	3UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5771.01A	SERINC5::CDYL2	0.15	tier2	In-frame	A0 : B0	A0 : B0	non-validated
PRAD	TCGA.HC.A6AS.01A	SERINC5::PPAP2A	1.3	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5771.01A	SERINC5::TTC39A	0.43	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
PRAD	TCGA.HC.A6AO.01A	SERPINA3::RPL23	0.087	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A8QZ.01A	SETD5::GADL1	0.026	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7233.01A	SETD5::MCM7	0.21	tier1	5UTR-CDS	A0 : B0	A0 : B0	non-validated
PRAD	TCGA.CH.5751.01A	SETD5::RP11-15G16.1	1.5	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8ID.01A	SF3A2::AZU1	0.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A87B.01A	SGMS1::VSTM4	3.5	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SC.01A	SGOL2::FBXO8	0.11	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A87K.01A	SGPL1::BTBD9	0.14	tier3	Out-of-frame	A0 : B0	A1 : B0	NA
PRAD	TCGA.V1.A9Z8.01A	SH2D4A::AP3M2	1.5	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7782.01A	SH3BGRL2::HMGCLL1	5.1	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9LZ.01A	SHQ1::PSMB7	1.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6361.01A	SIK2::PIR	1.8	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A876.01A	SIPA1L2::TRIM11	2.3	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O5.06A	SIPA1L3::LIG1	0.002	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	SIPA1L3::WDR62	0.009	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	SIRT5::PHACTR1	0.4	tier4	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WL.01A	SKIV2L2::BASP1	3.4	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A8D1.01A	SKIV2L2::CCNO	0.74	tier3	In-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.J4.A83I.01A	SKIV2L2::F2R	0.16	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5519.01A	SKIV2L2::SCCPDH	1.3	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A632.01A	SLC10A7::EYS	0.12	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6361.01A	SLC10A7::FKBP15	0.097	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.M7.A724.01A	SLC15A4::TMEM132D	0.16	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5743.01A	SLC1A5::STAT6	0.41	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.VN.A88Q.01A	SLC20A2::AC130352.1	0.093	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.A632.01A	SLC22A23::CAMTA1	0.037	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A87K.01A	SLC22A23::NRSN1	0.046	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6494.01A	SLC25A39::C17orf57	0.28	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.XK.AAJA.01A	SLC25A40::ADAM22	0.11	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5765.01A	SLC30A4::PDE2A	1.1	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5738.01A	SLC30A4::RP11-744N12.3	0.49	tier1	CDS-3UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7312.01B	SLC30A6::ACTR2	0.2	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.8259.01A	SLC30A7::CMTM8	0.33	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5504.01A	SLC37A1::MTA1	0.37	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A7NN.01A	SLC37A3::FLYWCH2	1.5	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KC.A7F5.01A	SLC39A11::OPN3	0.9	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.8198.01A	SLC40A1::TYK2	6.5	tier4	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.7521.01A	SLC41A2::ANAPC7	0.14	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8MM.01A	SLC41A3::ALDH1L1	0.078	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KC.A7F5.01A	SLC44A4::OGT	1.8	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9L4.01A	SLC45A2::CCDC125	0.41	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5768.01A	SLC45A3::AP1G2	0.11	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A7NG.01A	SLC45A3::ERG	0.6	tier4	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6351.01A	SLC45A3::ERG	0.6	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.7522.01A	SLC45A3::ERG	0.6	tier1	5UTR-CDS	A0 : B1	A0 : B0	non-validated
PRAD	TCGA.HC.7748.01A	SLC45A3::ERG	0.6	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7752.01A	SLC45A3::ERG	0.6	tier4	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7820.01A	SLC45A3::ERG	0.6	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7821.01A	SLC45A3::ERG	0.6	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.A6AN.01A	SLC45A3::ERG	0.6	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.J4.A83N.01A	SLC45A3::ERG	0.6	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A8I5.01A	SLC45A3::ERG	0.6	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.XJ.A9DQ.01A	SLC45A3::ERG	0.6	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.YL.A9WX.01A	SLC45A3::ERG	0.6	tier4	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.2A.A8W3.01A	SLC45A3::ETV1	0.8	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.A6AQ.01A	SLC45A3::ETV1	0.8	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.A8CY.01A	SLC45A3::ETV1	0.8	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.J4.A83M.01A	SLC45A3::ETV1	0.8	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A7AP.01A	SLC45A3::ETV1	0.8	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.M7.A71Y.01A	SLC45A3::ETV1	0.8	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.J4.A83I.01A	SLC45A3::FN1	0.087	tier4	3UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7212.01A	SLC45A3::FOXP1	0.85	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5789.01A	SLC45A3::SIAE	0.055	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8IL.01A	SLC45A3::SKIL	6.1	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5752.01A	SLC45A3::STAT6	0.039	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5497.01A	SLC45A3::STAT6	0.039	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8258.01A	SLC45A3::STAT6	0.039	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.FC.A5OB.01A	SLC45A3::ZBTB7B	0.43	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8260.01A	SLC45A3::ZNFX1	0.021	tier4	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.M7.A725.01A	SLC4A4::ARHGAP6	0.11	tier1	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.KK.A7AZ.01A	SLC4A4::C1orf135	0.047	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.VP.A875.01A	SLC4A4::GOLGA4	0.17	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8ID.01A	SLC7A1::HRSP12	0.27	tier4	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7318.01B	SLC9A3R1::FBXO18	0.075	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	SLK::INA	0.89	tier2	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.J4.A67L.01A	SMAD4::SKAP1	0.49	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.AATZ.01A	SMAD9::CCNA1	0.39	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5737.01A	SMAP1::CGA	0.29	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.TK.A8OK.01A	SMARCA1::ALG13	0.59	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A5A1.01A	SMARCA4::SLC44A2	0.017	tier3	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.A7NN.01A	SMARCB1::HRASLS2	100.0	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8265.01B	SMARCC1::SPINK8	100.0	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.XJ.A9DK.01A	SMG1::SNF8	1.3	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	SMG6::ANKFY1	0.15	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J9.A8CK.01A	SMG6::C10orf11	0.064	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	SMG6::DHX33	1.2	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8265.01B	SMG6::SHPK	0.065	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	SMOX::PANK2	0.38	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.XJ.A83H.01A	SMUG1::PPP2R5A	0.29	tier3	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.8216.01A	SMURF2::DEDD2	0.021	tier1	In-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.EJ.5518.01A	SMYD3::COPA	0.92	tier1	In-frame	A0 : B1	A0 : B1	NA
PRAD	TCGA.EJ.7789.01A	SMYD3::TRIM58	0.62	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7789.01A	SNAP91::BCKDHB	0.63	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8I6.01A	SNAP91::SMPX	0.54	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7232.01A	SNX19::USP28	0.31	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.XQ.A8TA.01A	SNX30::ALDOB	0.66	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8261.01A	SNX30::KIAA1958	3.2	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7748.01A	SORBS2::ARHGAP27	0.005	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.J4.8198.01A	SORBS2::ELK4	0.63	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.4L.AA1F.01A	SORBS2::MRPS35	1.4	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.8472.01A	SORL1::GLT8D1	0.9	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9MC.01A	SP3::SLC8A1	0.033	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8X3.01A	SPATS2::PPM1H	0.005	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.4L.AA1F.01A	SPECC1L::CPNE4	0.37	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WI.01A	SPEN::FHAD1	0.015	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.8265.01A	SPEN::TNFRSF1B	0.13	tier1	In-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.V1.A9OL.01A	SPOCK1::CDC23	0.16	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A8I4.01A	SPON2::CTBP1	0.081	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8HM.01A	SPON2::HS1BP3	0.002	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O5.06A	SPON2::PARP1	3.2	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8II.01A	SPTBN1::ECI2	0.5	tier1	CDS-5UTR	A1 : B0	A1 : B0	NA
PRAD	TCGA.KK.A8ID.01A	SPTBN4::SIPA1L3	0.2	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A87C.01A	SREBF1::STAT3	0.21	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8I9.01A	SRPK1::CCHCR1	1.7	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.8262.01A	SRRM1::NFYC	1.1	tier3	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8X3.01A	SRRM2::SNRPE	1.1	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.8265.01A	SS18::DOCK2	0.75	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A67T.01A	SSFA2::PTPN4	0.16	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8265.01A	ST14::APLP2	0.011	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A67R.01A	ST6GAL1::PSMC3	0.25	tier1	5UTR-CDS	A0 : B0	A0 : B1	NA
PRAD	TCGA.EJ.A46G.01A	ST7::CAPZA2	0.86	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9OL.01A	ST7::CAPZA2	0.86	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.2A.A8W1.01A	ST7::PTPRZ1	2.9	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9OL.01A	ST7OT4::CAPZA2	0.47	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7233.01A	STARD13::KLF5	2.6	tier1	Out-of-frame	A1 : B0	A0 : B0	non-validated
PRAD	TCGA.EJ.5511.01A	STAT3::ETV4	0.41	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A8D0.01A	STAT5B::PFAS	0.023	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.XJ.A9DI.01A	STAU1::CYP26B1	0.17	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.XK.AAIV.01A	STAU2::MTFR1	0.38	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7209.01A	STX3::MS4A15	1.4	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5518.01A	STX6::PRRC2C	0.51	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A7NN.01A	SUFU::CYP26A1	0.4	tier4	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.A9S4.01A	SUFU::KCNH2	0.84	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.8472.01A	SUZ12::AC135724.1	0.099	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.CH.5791.01A	SVIL::RFC5	0.69	tier2	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A8QZ.01A	SYNJ2::KIF25	0.42	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.KK.A5A1.01A	SYNRG::FBXO47	0.67	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A875.01A	TAB2::C6orf162	0.11	tier4	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6356.01A	TAF3::ZNF365	0.72	tier3	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.G9.6363.01A	TAOK1::ABHD15	0.56	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5794.01A	TAOK3::AGTPBP1	0.016	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A87D.01A	TASP1::ESF1	3.3	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7AU.01A	TASP1::MACROD2	1.5	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.XQ.A8TA.01A	TASP1::SEL1L2	0.19	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E1.01A	TBC1D25::HSPA9	1.7	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.M7.A725.01A	TBCK::WDHD1	0.027	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.8469.01A	TBL1XR1::ADAM33	3.6	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5507.01A	TBL1XR1::PIK3CA	0.21	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.J9.A52E.01A	TCEB3::ZCCHC11	0.025	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.M7.A725.01A	TCF12::DSCAM	0.53	tier4	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.EJ.A8FO.01A	TCF12::NPAS1	5.4	tier1	In-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.V1.A8WS.01A	TCF12::TTC23	0.84	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.HC.7744.01A	TCF3::APC2	0.044	tier3	CDS-5UTR	A0 : B0	A0 : B0	non-validated
PRAD	TCGA.ZG.A9LN.01A	TCF7L2::VTI1A	0.6	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SP.01B	TCHP::PPTC7	0.22	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6351.01A	TCIRG1::TMC5	0.13	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O5.06A	TDRD12::TEAD2	0.095	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7821.01A	TDRD7::GNA14	1.2	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5503.01A	TEAD1::MICAL2	0.38	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.YL.A9WJ.01A	TESC::ASAH1	0.33	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7785.01A	TET1::EFHC2	1.1	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7794.01A	TET2::KLK3	2.4	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8I5.01A	TET2::LARP7	0.84	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7315.01A	TET3::KRT1	1.6	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9L9.01A	TFAP2A::CDK5RAP1	0.25	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.A9S7.01A	TFRC::MUTED	0.49	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9LN.01A	TFRC::TCTEX1D2	0.12	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A59X.01A	THSD7B::DARS	0.51	tier1	5UTR-CDS	A0 : B0	A0 : B1	NA
PRAD	TCGA.KK.A7AP.01A	TIA1::ACTR2	0.66	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6499.01A	TIMP2::CEP57	0.41	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7745.01A	TIMP3::SPCS3	0.062	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7213.01A	TLN1::EIF4G1	0.012	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5511.01A	TM2D3::PTRF	2.2	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5497.01A	TM9SF3::RPP30	0.27	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A632.01A	TM9SF4::ZNF423	0.2	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.G9.6371.01A	TMBIM6::CLCN3	0.78	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8ID.01A	TMC6::UACA	0.21	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7213.01A	TMCO4::ERRFI1	0.33	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8HM.01A	TMED10::PSMD11	0.43	tier2	Out-of-frame	A0 : B1	A0 : B1	NA
PRAD	TCGA.ZG.A9NI.01A	TMEFF2::RLIM	0.023	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8216.01A	TMEM104::AC011497.1	0.072	tier1	CDS-3UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7318.01B	TMEM104::LIN52	0.47	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6494.01A	TMEM120B::UBTF	1.3	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7736.01A	TMEM132D::PAH	0.85	tier2	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.7115.01A	TMEM135::GRM5	1.1	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.XJ.A83G.01A	TMEM182::ARHGAP15	0.38	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7AV.01A	TMEM39A::C3orf15	0.005	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5505.01A	TMEM39A::EPHA6	0.62	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5789.01A	TMEM59::MYBPC1	1.2	tier3	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8I5.01A	TMEM66::TNKS	0.74	tier2	In-frame	A0 : B1	A0 : B1	NA
PRAD	TCGA.FC.A4JI.01A	TMEM68::DPYS	4.2	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8IM.01A	TMEM68::ZNF821	0.32	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.XQ.A8TA.01A	TMEM8A::CSDA	0.24	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.7742.01A	TMEM97::BLMH	0.76	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6371.01A	TMPRSS2::ARFGEF2	1.0	tier2	3UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7784.01A	TMPRSS2::ATF7IP	2.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.FC.A6HD.01A	TMPRSS2::BRAF	1.0	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.2A.A8VL.01A	TMPRSS2::ERG	2.0	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.2A.A8VT.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.2A.A8VV.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.2A.AAYU.01A	TMPRSS2::ERG	2.0	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.4L.AA1F.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5739.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5740.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5741.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5743.01A	TMPRSS2::ERG	2.0	tier3	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5746.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5752.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5764.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5765.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5768.01A	TMPRSS2::ERG	2.0	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5769.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5789.01A	TMPRSS2::ERG	2.0	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5790.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5791.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5794.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5495.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5496.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5497.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5498.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5499.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5502.01A	TMPRSS2::ERG	2.0	tier2	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5506.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5507.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5508.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5512.01A	TMPRSS2::ERG	2.0	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5516.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5521.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5522.01A	TMPRSS2::ERG	2.0	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5524.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5525.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5526.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5527.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5530.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5542.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.7315.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.7321.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.7325.01B	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.7327.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.7328.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.7783.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.7784.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.7785.01A	TMPRSS2::ERG	2.0	tier2	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7793.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.7797.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.8469.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.8472.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.A46D.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.A46F.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.A65D.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.A65F.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.A7NF.01A	TMPRSS2::ERG	2.0	tier4	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.A8FO.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.FC.7708.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6329.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6332.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6342.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6351.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6353.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6354.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6356.01A	TMPRSS2::ERG	2.0	tier4	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6361.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6362.01A	TMPRSS2::ERG	2.0	tier2	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6363.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6364.01A	TMPRSS2::ERG	2.0	tier2	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6365.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	validated
PRAD	TCGA.G9.6373.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6377.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6384.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6385.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.7509.01A	TMPRSS2::ERG	2.0	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.7525.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.A9S4.01A	TMPRSS2::ERG	2.0	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.A9S7.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.H9.A6BY.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7077.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7081.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7209.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7212.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7213.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7230.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7231.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7232.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7744.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	validated
PRAD	TCGA.HC.7747.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7818.01A	TMPRSS2::ERG	2.0	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7819.01A	TMPRSS2::ERG	2.0	tier2	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.8213.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.8257.01A	TMPRSS2::ERG	2.0	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8259.01A	TMPRSS2::ERG	2.0	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8260.01A	TMPRSS2::ERG	2.0	tier4	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.8262.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.A48F.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.A632.01A	TMPRSS2::ERG	2.0	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A6HY.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.A76X.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.A8D0.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.A8D1.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.J4.8198.01A	TMPRSS2::ERG	2.0	tier2	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.J4.A67K.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.J4.A67L.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.J4.A67R.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.J4.A67S.01A	TMPRSS2::ERG	2.0	tier2	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.J4.A67T.01A	TMPRSS2::ERG	2.0	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A6G1.01A	TMPRSS2::ERG	2.0	tier2	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.J4.A6M7.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.J4.A83I.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.J4.A83J.01A	TMPRSS2::ERG	2.0	tier4	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.J4.A83K.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.J4.AATV.01A	TMPRSS2::ERG	2.0	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.J9.A52B.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.J9.A8CK.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.J9.A8CM.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.KC.A4BN.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.KC.A4BR.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.KC.A4BV.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.KC.A7F6.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A59Y.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A6DY.01A	TMPRSS2::ERG	2.0	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A6E1.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A6E2.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A6E4.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A6E6.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A7AU.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A7B1.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A7B2.01A	TMPRSS2::ERG	2.0	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A7B4.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A8I4.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A8I8.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A8IA.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A8IC.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A8IH.01A	TMPRSS2::ERG	2.0	tier2	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A8II.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A8IM.01A	TMPRSS2::ERG	2.0	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.M7.A71Z.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.MG.AAMC.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.QU.A6IN.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.TP.A8TT.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.V1.A8MK.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.V1.A8WS.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.V1.A9O9.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.V1.A9OY.01A	TMPRSS2::ERG	2.0	tier2	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9ZG.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.VN.A88K.01A	TMPRSS2::ERG	2.0	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.VN.A88L.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.VN.A88M.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.VN.A88Q.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.VP.A872.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.VP.A875.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.VP.A876.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.VP.A879.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.VP.A87C.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.VP.A87D.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.VP.A87K.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.X4.A8KQ.01A	TMPRSS2::ERG	2.0	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.XJ.A83F.01A	TMPRSS2::ERG	2.0	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.XJ.A9DI.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.XJ.A9DK.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.XQ.A8TB.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.YL.A8HJ.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.YL.A8HK.01A	TMPRSS2::ERG	2.0	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8HL.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.YL.A8SA.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.YL.A8SF.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.YL.A8SL.01B	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.YL.A8SP.01B	TMPRSS2::ERG	2.0	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WL.01A	TMPRSS2::ERG	2.0	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.YL.A9WX.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.ZG.A8QZ.01A	TMPRSS2::ERG	2.0	tier2	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.ZG.A9L1.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.ZG.A9L2.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.ZG.A9L4.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.ZG.A9LZ.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.ZG.A9N3.01A	TMPRSS2::ERG	2.0	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5501.01A	TMPRSS2::ETV1	0.78	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.7788.01A	TMPRSS2::ETV1	0.78	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7818.01A	TMPRSS2::ETV1	0.78	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SC.01A	TMPRSS2::ETV1	0.78	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6351.01A	TMPRSS2::ETV4	0.96	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6371.01A	TMPRSS2::ETV4	0.96	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7077.01A	TMPRSS2::ETV4	0.96	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7079.01A	TMPRSS2::ETV4	0.96	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KC.A7FD.01A	TMPRSS2::ETV4	0.96	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7AW.01A	TMPRSS2::ETV4	0.96	tier4	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.M7.A725.01A	TMPRSS2::ETV4	0.96	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7AZ.01A	TMPRSS2::ETV5	0.14	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9L5.01A	TMPRSS2::ETV5	0.14	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KC.A4BR.01A	TMPRSS2::GUCA2A	0.22	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8WS.01A	TMPRSS2::INPP4B	1.0	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9L1.01A	TMPRSS2::MLLT3	0.78	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5762.01A	TMPRSS2::MORC3	1.7	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.8469.01A	TMPRSS2::MRPS6	0.11	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9L2.01A	TMPRSS2::PDE9A	0.83	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.8474.01A	TMPRSS2::SARS	0.22	tier1	In-frame	A0 : B0	A0 : B1	NA
PRAD	TCGA.KK.A59Y.01A	TMPRSS2::TMEFF2	4.7	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.7521.01A	TMSB10::CD63	100.0	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O9.01A	TMTC3::ACSS3	1.2	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.A9S4.01A	TMTC3::CPNE4	0.4	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5792.01A	TMTC3::LIN7A	0.011	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9LZ.01A	TNFAIP8::CCNB1IP1	0.21	tier3	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WH.01A	TNKS2::HECTD2	1.1	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5519.01A	TNPO1::ENC1	0.18	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.2A.A8W1.01A	TOB2::MRPS18B	0.86	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E4.01A	TOMM7::KLK2	0.95	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7748.01A	TOR1B::ARHGAP27	1.3	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A59V.01A	TOX3::CNTN5	0.016	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.WW.A8ZI.01A	TP53::ECSIT	0.55	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8IC.01A	TP53::FARP2	0.11	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5525.01A	TP53::KIAA0753	0.13	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6371.01A	TPD52::CCT5	0.12	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8IF.01A	TPD52L1::SAMD3	0.31	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7791.01A	TPT1::MFN1	0.017	tier3	NA	A0 : B0	A0 : B0	non-validated
PRAD	TCGA.HC.A6HY.01A	TPT1::PLEKHB2	0.17	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8I4.01A	TRAF3IP2::KIAA1324	0.18	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	TRAPPC10::UBASH3A	2.2	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5750.01A	TRIM33::CSDE1	0.002	tier1	In-frame	A0 : B1	A0 : B1	non-validated
PRAD	TCGA.CH.5751.01A	TRIM33::CSDE1	0.002	tier1	In-frame	A0 : B1	A0 : B1	NA
PRAD	TCGA.EJ.5495.01A	TRIO::ATAD1	1.8	tier4	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5741.01A	TRIO::IQUB	0.37	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.VP.A875.01A	TROVE2::CACNA1S	2.4	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8I5.01A	TRPM4::PPFIA3	0.056	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.G9.6371.01A	TRPM8::RABEP1	1.1	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7AZ.01A	TRPM8::SLC4A4	0.036	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5503.01A	TSC1::CEL	0.73	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E2.01A	TSC22D1::NUFIP1	0.6	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7233.01A	TSC22D2::SDCCAG8	1.5	tier3	Out-of-frame	A0 : B0	A0 : B0	validated
PRAD	TCGA.HC.7748.01A	TSC22D3::AP3M1	1.0	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7738.01A	TSPAN1::TFF3	0.77	tier1	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6371.01A	TSPAN1::USP20	3.1	tier3	3UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	TTBK2::TGM7	1.6	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.FC.A4JI.01A	TTC21B::COBLL1	0.53	tier1	3UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.HC.7744.01A	TTC21B::SLC38A11	0.017	tier1	Out-of-frame	A0 : B0	A0 : B0	validated
PRAD	TCGA.V1.A8WS.01A	TTC23::TCF12	0.84	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5751.01A	TTC27::DHX57	0.5	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7AW.01A	TTC39A::MRPL37	1.2	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KC.A7FA.01A	TTC6::ACTN4	1.0	tier2	Out-of-frame	A0 : B1	A0 : B1	NA
PRAD	TCGA.FC.A4JI.01A	TTC6::ADAMTS5	0.54	tier2	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A872.01A	TTC6::C9orf102	0.95	tier4	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	TTC6::FAM177A1	0.68	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WH.01A	TTC6::HOXA1	1.8	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	TTC6::KIAA0391	0.16	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.CH.5761.01A	TTC6::MIPOL1	1.5	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5514.01A	TTC6::MIPOL1	1.5	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7331.01A	TTC6::MIPOL1	1.5	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A65B.01A	TTC6::MIPOL1	1.5	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A65J.01A	TTC6::MIPOL1	1.5	tier2	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A7NN.01A	TTC6::MIPOL1	1.5	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.8261.01A	TTC6::MIPOL1	1.5	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E5.01A	TTC6::MIPOL1	1.5	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9ZK.01A	TTC6::MIPOL1	1.5	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A8QW.01A	TTC6::MIPOL1	1.5	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9LU.01A	TTC6::MIPOL1	1.5	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.KC.A7F5.01A	TTC6::PAX9	0.27	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9N3.01A	TTC6::POLR3A	1.4	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WH.01A	TTC6::SKAP2	0.24	tier4	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9LM.01A	TTI1::C3orf67	2.0	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KC.A4BL.01A	TTLL1::MCAT	1.0	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A5A1.01A	TTLL5::BATF	2.0	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E1.01A	TTLL7::SAMD13	0.13	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9ZI.01A	TUBB3::TRPM5	0.28	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5522.01A	TUBGCP2::UBE4A	0.057	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.7210.01A	TUSC3::LOXL2	1.6	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7233.01A	TXNDC16::ARG2	0.33	tier1	Out-of-frame	A1 : B0	A0 : B0	validated
PRAD	TCGA.EJ.7782.01A	TXNDC5::RREB1	3.3	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5750.01A	TYW1::WBSCR17	5.6	tier1	In-frame	A0 : B0	A0 : B0	non-validated
PRAD	TCGA.VP.A87B.01A	UAP1::LIX1L	4.0	tier1	In-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.EJ.7781.01A	UBE2D3::CA10	0.48	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A8WS.01A	UBE2D3::GSTCD	2.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.2A.A8W1.01A	UBE2E2::ZNF385D	0.44	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HI.7168.01A	UBE2R2::ITLN1	2.1	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A59X.01A	UBR2::XPO5	0.43	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8S9.01A	UCK2::CD37	0.022	tier3	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.VP.A87K.01A	UGGT1::FOXP1	0.8	tier3	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5521.01A	UGGT2::ANKRD16	1.6	tier1	CDS-3UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.J9.A52D.01A	UGGT2::TRPC4	0.7	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.CH.5740.01A	UHRF1BP1::RIOK1	0.96	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YJ.A8SW.01A	UIMC1::MXD3	0.21	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.J9.A8CP.01A	UNC5D::EIF4EBP1	1.1	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5494.01A	UPF1::EIF3M	0.96	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6377.01A	UQCC::MRPS35	3.0	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7744.01A	UQCRC1::FNIP2	1.7	tier4	3UTR-CDS	A0 : B1	A0 : B0	non-validated
PRAD	TCGA.EJ.5518.01A	USF1::UCK2	0.088	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.J9.A8CK.01A	USP1::EFCAB7	0.33	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.A6AN.01A	USP22::ATP2A3	0.91	tier3	In-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.V1.A8ML.01A	USP22::RNF167	0.36	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.HI.7168.01A	USP31::ERI2	0.11	tier2	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.2A.A8W3.01A	USP43::TMEM116	0.25	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.G9.6351.01A	USP45::RIOK1	0.63	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.G9.6361.01A	USP48::PSMA8	0.3	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WY.01A	USP6NL::ANKRD16	5.5	tier1	CDS-3UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7818.01A	USP9X::MAPKAPK5	0.23	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A8QY.01A	UTP20::SCYL2	0.15	tier4	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5763.01A	UTRN::EIF4G3	0.78	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7232.01A	UTRN::MMADHC	0.76	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5741.01A	UTRN::PLAGL1	0.23	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6361.01A	UVRAG::PCBD1	1.8	tier2	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5498.01A	VAMP3::SCAF4	0.027	tier3	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.XQ.A8TA.01A	VAV2::COL27A1	0.41	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.2A.AAYU.01A	VDAC2::NEO1	0.4	tier1	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.CH.5740.01A	VGLL4::FOXP1	0.27	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7318.01B	VIPAR::C14orf45	1.1	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7B4.01A	VPS13B::AKAP7	1.5	tier1	In-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.J4.A67T.01A	VPS13B::C8orf47	0.25	tier3	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5530.01A	VPS13C::CENPN	0.097	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.KK.A7B1.01A	VPS13C::SH2D4A	1.6	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.KK.A5A1.01A	VPS13D::TNFRSF8	0.18	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A8QW.01A	VPS26A::AGBL4	1.6	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.7783.01A	VPS28::SF3A1	0.053	tier3	3UTR-CDS	A0 : B1	A0 : B1	NA
PRAD	TCGA.KK.A7B1.01A	VSIG1::MID2	0.095	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5766.01A	VTI1A::SUGP2	0.2	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6356.01A	WAPAL::SIAE	1.3	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9KY.01A	WASF3::CDK8	0.52	tier2	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.KK.A6E2.01A	WASL::FEZF1	0.33	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.A67M.01A	WDFY3::HNRNPD	5.4	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.2A.A8VT.01A	WDR20::LRP10	0.062	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7230.01A	WDR52::SLC35A5	1.6	tier2	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9KY.01A	WDR70::RAI14	0.15	tier2	In-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.2A.A8W3.01A	WIPF2::RAMP2	0.72	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5525.01A	WLS::TBX3	0.46	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.5515.01A	WTAP::SOCS2	0.49	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.2A.A8VX.01A	WWC1::FMN2	0.13	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.J4.A83J.01A	WWC1::SNTG2	0.14	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.VN.A88M.01A	WWTR1::ATR	0.42	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7736.01A	XBP1::CCT5	2.9	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6348.01A	XBP1::KLK2	0.66	tier3	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O9.01A	XPO5::KIF6	0.041	tier1	Out-of-frame	A1 : B0	A1 : B0	NA
PRAD	TCGA.KK.A8IH.01A	XRCC5::ACADL	0.097	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7211.01A	ZBTB20::CLDN11	0.002	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.8468.01A	ZBTB20::LSAMP	0.81	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A46G.01A	ZBTB20::LSAMP	0.81	tier1	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.J4.AATZ.01A	ZBTB20::LSAMP	0.81	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A6E8.01A	ZBTB20::RP11-631B21.2	2.0	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.TP.A8TV.01A	ZBTB20::TIGIT	1.7	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.FC.A5OB.01A	ZBTB7B::NUCKS1	0.068	tier1	5UTR-CDS	A0 : B1	A0 : B0	NA
PRAD	TCGA.KC.A7F3.01A	ZC3H15::CPS1	0.13	tier1	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.G9.6348.01A	ZC3H15::SERINC1	0.9	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9M4.01A	ZCCHC14::IMPA2	0.033	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O5.06A	ZFAT::RP11-240B13.2	1.4	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7232.01A	ZFHX3::ALS2CR11	3.2	tier1	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.G9.7510.01A	ZFHX3::ARL15	0.12	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A5A1.01A	ZFHX3::C16orf47	0.74	tier4	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WL.01A	ZFHX3::ENY2	1.7	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.7522.01A	ZFHX3::ZMAT4	1.4	tier1	Out-of-frame	A0 : B0	A0 : B0	non-validated
PRAD	TCGA.M7.A725.01A	ZFHX3::ZNF821	0.091	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A9WY.01A	ZMAT4::ELP3	1.1	tier2	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.CH.5752.01A	ZMIZ1::DENND2A	0.024	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7077.01A	ZMIZ1::ZCCHC24	0.031	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7818.01A	ZMYND11::LYZL1	0.44	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.ZG.A9LZ.01A	ZMYND8::RNF43	0.007	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.7818.01A	ZMYND8::SPINLW1-WFDC6	2.7	tier3	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7077.01A	ZNF10::SPATA17	0.26	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A7NN.01A	ZNF142::POLR1B	0.28	tier4	5UTR-CDS	A0 : B0	A0 : B1	NA
PRAD	TCGA.VN.A88P.01A	ZNF148::MYLK	0.023	tier2	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8ID.01A	ZNF263::KCTD5	0.024	tier2	3UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.YL.A8SR.01B	ZNF292::EYS	0.095	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A8IJ.01A	ZNF292::PRSS54	2.4	tier2	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7081.01A	ZNF292::PTPRO	0.58	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7818.01A	ZNF329::EPN1	1.2	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7744.01A	ZNF395::SLC25A44	0.6	tier1	5UTR-CDS	A0 : B0	A0 : B0	non-validated
PRAD	TCGA.EJ.5508.01A	ZNF43::EFHB	0.028	tier1	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A5A1.01A	ZNF433::CACNA1A	2.5	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.G9.6354.01A	ZNF461::AKT1	0.44	tier3	In-frame	A1 : B1	A0 : B0	NA
PRAD	TCGA.V1.A9O5.06A	ZNF585A::CCDC3	1.6	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9O5.06A	ZNF585A::FXYD1	1.0	tier1	CDS-5UTR	A1 : B0	A0 : B0	NA
PRAD	TCGA.J9.A52E.01A	ZNF589::ALS2CL	0.013	tier3	CDS-5UTR	A0 : B0	A0 : B0	NA
PRAD	TCGA.EJ.A8FO.01A	ZNF618::MTAP	0.56	tier1	In-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.7744.01A	ZNF618::PARP4	0.15	tier1	Out-of-frame	A1 : B0	A0 : B0	validated
PRAD	TCGA.2A.A8VL.01A	ZNF69::WDR16	1.9	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.J9.A8CP.01A	ZNF716::C7orf72	0.37	tier1	Out-of-frame	A1 : B0	A0 : B0	NA
PRAD	TCGA.HC.8262.01A	ZNF821::CHD9	0.23	tier1	Out-of-frame	A0 : B1	A0 : B0	NA
PRAD	TCGA.EJ.5511.01A	ZNF827::EEF2	0.84	tier3	NA	A0 : B0	A0 : B0	NA
PRAD	TCGA.HC.7819.01A	ZNF844::SLC4A4	1.8	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.V1.A9ZK.01A	ZNRF2::BBS9	1.7	tier1	In-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.KK.A7B4.01A	ZRANB3::TMEM163	5.6	tier1	5UTR-CDS	A0 : B0	A0 : B0	NA
PRAD	TCGA.J9.A52D.01A	ZSWIM6::CWC27	1.4	tier1	Out-of-frame	A0 : B0	A0 : B0	NA
PRAD	TCGA.VP.A87K.01A	ZZZ3::CXCL11	0.071	tier1	5UTR-5UTR	A0 : B0	A0 : B0	NA