| Tumor type can be selected from twelve tumor types. |
| Cancer | TCGA SampleId | FusionPair | E-value | Tier | Frame | phosphorylation | ubiquitination | WGS |
|---|---|---|---|---|---|---|---|---|
| STAD | TCGA.BR.8590.01A | ABCC3::ACSF2 | 0.41 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4GH.01A | ABCC3::XYLT2 | 0.18 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8DZ.01A | ABR::BAI1 | 0.36 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | ABTB2::APIP | 0.83 | tier4 | Out-of-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.4366.01A | AC073995.2::CCDC138 | 0.46 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8483.01A | ACACA::RARA | 0.11 | tier1 | CDS-5UTR | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.BR.4366.01A | ACER3::C11orf30 | 0.52 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8680.01A | ACVR1B::SUPT16H | 0.063 | tier3 | 3UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | ADCK2::TBXAS1 | 0.2 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8060.01A | ADNP::KCNG1 | 1.7 | tier1 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.8526.01A | AEBP2::PLEKHA5 | 0.24 | tier4 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8361.01A | AFMID::TMC8 | 0.078 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.8535.01A | AGPAT3::PDXK | 1.5 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8060.01A | AHCYL1::GNAI3 | 0.46 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A925.01A | AK2::MKL1 | 0.047 | tier1 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.R5.A805.01A | AKAP13::MUSK | 0.45 | tier2 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8687.01A | AL139022.1::CCNA2 | 0.98 | tier3 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4H6.01A | AL360181.1::ZNF350 | 0.19 | tier2 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.R5.A7ZE.01B | AMBRA1::CAT | 0.13 | tier1 | 5UTR-CDS | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.8373.01A | ANAPC5::KDM2B | 0.14 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.BR.4357.01A | ANKHD1::PAIP2 | 0.056 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4438.01A | ANKIB1::PEX1 | 0.27 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.RD.A8MW.01A | ANKIB1::TNFRSF17 | 0.24 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A94O.01A | ANKRD11::AC009113.1 | 0.37 | tier3 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | ANKRD11::C16orf7 | 0.076 | tier1 | 5UTR-3UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.8524.01A | ANKRD11::ERGIC2 | 0.48 | tier2 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8485.01A | ANKRD11::FANCA | 0.012 | tier3 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4QI.01A | ANKRD11::FANCA | 0.012 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.FP.8209.01A | ANKRD12::DLGAP1 | 0.19 | tier3 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.MX.A666.01A | ANKRD52::ASPHD1 | 1.6 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8286.01A | ANKS3::GLYR1 | 0.008 | tier2 | Out-of-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.CG.4436.01A | ANO10::SCN5A | 0.023 | tier3 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7901.01A | AP2A2::TALDO1 | 2.7 | tier1 | In-frame | A1 : B1 | A0 : B1 | NA |
| STAD | TCGA.VQ.AA6J.01A | AP3B1::CAMLG | 0.038 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.R5.A7ZE.01B | AP3D1::PLEKHF1 | 1.1 | tier1 | CDS-5UTR | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.BR.7959.01A | APAF1::HOXC10 | 0.49 | tier4 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A452.01A | ARHGAP1::CKAP5 | 0.86 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | ARHGAP12::KIF5B | 1.0 | tier1 | CDS-3UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.AA6B.01A | ARHGAP12::KIF5B | 1.0 | tier2 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4370.01A | ARHGAP18::C6orf191 | 0.29 | tier1 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.R5.A7O7.01A | ARHGAP21::MSRB2 | 1.6 | tier2 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | ARHGAP27::KIAA1267 | 0.7 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7716.01A | ARHGAP39::ZNF16 | 0.01 | tier4 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8373.01A | ARHGAP5::NPAS3 | 0.16 | tier1 | Out-of-frame | A0 : B1 | A0 : B0 | non-validated |
| STAD | TCGA.CG.4449.01A | ARHGEF10L::PAK4 | 0.037 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A452.01A | ARHGEF12::POU2F3 | 0.085 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4438.01A | ARHGEF12::POU2F3 | 0.085 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.R5.A7ZE.01B | ARHGEF2::CCT3 | 1.2 | tier1 | In-frame | A0 : B0 | A0 : B1 | NA |
| STAD | TCGA.R5.A7O7.01A | ARHGEF3::CTNND2 | 0.22 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4GH.01A | ARID1A::RPS6KA1 | 0.08 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8679.01A | ARID1A::UBE2U | 5.7 | tier2 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.R5.A7ZE.01B | ARMC7::CDR2L | 0.27 | tier1 | In-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.CG.4443.01A | ASAH2::SGMS1 | 0.18 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.BR.A4CR.01A | ASAP1::RIMS2 | 0.14 | tier4 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | ASCC1::CDH23 | 3.9 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | ASCC1::MICU1 | 0.006 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | ASH1L::SLC28A3 | 0.17 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8E2.01A | ASXL1::TM9SF4 | 0.083 | tier1 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4QI.01A | ATF7IP::VIPR2 | 0.016 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4304.01A | ATG7::TBC1D5 | 0.028 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4CR.01A | ATP11A::ULK4 | 1.5 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8682.01A | ATP1A1::DDX21 | 2.2 | tier3 | NA | A0 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.BR.8289.01A | ATP1A1::IGSF3 | 0.08 | tier4 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | ATP2B4::RP11-352D3.2 | 2.6 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.8536.01A | ATP8A1::PDS5A | 0.05 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.AA6D.01A | ATR::R3HDM2 | 0.37 | tier1 | In-frame | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.R5.A7O7.01A | ATXN7::ZNF385D | 0.028 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4477.01A | B9D2::HNRNPL | 0.93 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7901.01A | BACE2::WDR81 | 0.21 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.AA6D.01A | BAD::TRMT112 | 0.16 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4443.01A | BAZ1B::MLXIPL | 8.7 | tier1 | Out-of-frame | A1 : B1 | A0 : B0 | non-validated |
| STAD | TCGA.VQ.AA6D.01A | BAZ2A::NACA | 0.17 | tier1 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4CR.01A | BAZ2B::STK39 | 0.093 | tier4 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A92D.01A | BCAS3::VMP1 | 0.97 | tier2 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | BCAS4::SLC9A8 | 1.1 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4444.01A | BCL7A::MSI1 | 2.3 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4443.01A | BIRC2::YAP1 | 0.21 | tier1 | In-frame | A0 : B0 | A0 : B0 | validated |
| STAD | TCGA.CG.4449.01A | BLM::ABHD2 | 1.4 | tier1 | 5UTR-CDS | A0 : B1 | A0 : B1 | NA |
| STAD | TCGA.BR.8373.01A | BOP1::CPSF1 | 0.11 | tier1 | In-frame | A0 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.VQ.A91N.01A | BOP1::TONSL | 0.37 | tier3 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | BPTF::PITPNC1 | 0.85 | tier1 | Out-of-frame | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.VQ.A8E2.01A | BRAF::MRPS33 | 0.26 | tier1 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4GH.01A | BRD4::ZC3H15 | 0.11 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.RD.A7C1.01A | BZW2::GAP43 | 1.5 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.A4MH.01A | C10orf18::NET1 | 0.086 | tier2 | Out-of-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.8590.01A | C11orf30::UVRAG | 1.0 | tier3 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8DU.01A | C11orf9::C11orf66 | 0.33 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8PK.01A | C12orf35::LOH12CR1 | 1.6 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.FP.7916.01A | C12orf51::RPH3A | 0.23 | tier1 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.IN.AB1X.01A | C16orf70::CRTC3 | 0.15 | tier1 | In-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.VQ.A922.01A | C16orf72::ABAT | 0.008 | tier4 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.RD.A7BT.01A | C17orf108::HAP1 | 0.33 | tier1 | 3UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8286.01A | C18orf45::TAF4B | 0.5 | tier3 | Out-of-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | C19orf2::C19orf12 | 0.33 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8678.01A | C19orf2::PLEKHF1 | 0.16 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8E2.01A | C19orf2::PLEKHF1 | 0.16 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4CS.01A | C21orf63::ABCG1 | 0.25 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | C22orf34::HDAC10 | 0.72 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | C2CD3::XRRA1 | 0.035 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | C3orf55::KCNAB1 | 2.6 | tier1 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.AA6I.01A | C6orf106::PINX1 | 0.24 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | C7orf26::GRID2IP | 0.98 | tier2 | Out-of-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.VQ.A925.01A | C9orf3::HIATL1 | 0.1 | tier2 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.A48A.01A | C9orf46::GLIS3 | 0.76 | tier2 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8060.01A | C9orf85::C9orf57 | 0.068 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8485.01A | CAB39::GBF1 | 3.0 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.A48C.01A | CACNA1C::CLEC2A | 0.42 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A92D.01A | CACNB1::KRT222 | 1.2 | tier2 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8PQ.01A | CALR3::ZSCAN18 | 0.076 | tier4 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4366.01A | CASC3::CDK12 | 0.12 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8361.01A | CASP8::CFLAR | 0.038 | tier3 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | CASZ1::MASP2 | 0.057 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8590.01A | CASZ1::MTOR | 0.71 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4367.01A | CASZ1::SPSB1 | 0.072 | tier2 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.RD.A8MV.01A | CBL::SC5DL | 0.074 | tier2 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A452.01A | CC2D1A::ZSWIM4 | 0.046 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.FP.8631.01A | CCAR1::MCU | 0.54 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.A48A.01A | CCDC91::RP11-677C1.2 | 0.32 | tier1 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.8535.01A | CCNB2::RNF111 | 0.093 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A92D.01A | CCNB2::TCF12 | 1.2 | tier2 | CDS-3UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4QI.01A | CCND3::EHMT2 | 0.1 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8373.01A | CCND3::TRERF1 | 0.19 | tier1 | 5UTR-5UTR | A0 : B0 | A0 : B0 | validated |
| STAD | TCGA.CG.4477.01A | CD274::IGFBPL1 | 1.7 | tier1 | CDS-3UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8060.01A | CD2AP::UQCRH | 0.4 | tier2 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | CD46::MAPKAPK2 | 1.2 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | CD97::EPS15L1 | 1.2 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4253.01A | CDC123::RAB18 | 0.54 | tier4 | Out-of-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.FP.8631.01A | CDC27::SYT13 | 0.31 | tier2 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.D7.6820.01A | CDC42EP4::AMZ2 | 0.062 | tier2 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.EQ.8122.01A | CDC6::JUP | 4.7 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8679.01A | CDK17::C12orf63 | 0.034 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4QI.01A | CDK2AP1::RILPL1 | 0.17 | tier4 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A92D.01A | CDK5RAP3::SP2 | 0.76 | tier3 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.RD.A8N6.01A | CDK6::ANKIB1 | 0.72 | tier4 | In-frame | A1 : B1 | A1 : B0 | NA |
| STAD | TCGA.D7.8576.01A | CDK8::GTF2F2 | 1.9 | tier3 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.IN.A6RL.01A | CDKN2A::SOBP | 0.065 | tier1 | Out-of-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.A452.01A | CELF1::KBTBD4 | 2.9 | tier3 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8486.01A | CERS6::ABCB11 | 0.33 | tier1 | In-frame | A0 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.BR.4357.01A | CHD6::DHX58 | 0.083 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8687.01A | CHKA::CCNB3 | 0.42 | tier3 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8590.01A | CHMP1A::FANCA | 0.14 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | CHMP4B::CBFA2T2 | 0.45 | tier1 | In-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.VQ.A92D.01A | CLCN3::PALLD | 0.44 | tier2 | Out-of-frame | A1 : B1 | A0 : B0 | NA |
| STAD | TCGA.VQ.AA6J.01A | CLCN5::PAGE1 | 0.067 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.8610.01A | CLIC4::C1orf130 | 0.18 | tier1 | Out-of-frame | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.BR.4369.01A | CLIP1::TNIK | 0.034 | tier1 | In-frame | A1 : B1 | A0 : B0 | NA |
| STAD | TCGA.HU.8610.01A | CLK2::PPP1R12B | 0.02 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8P3.01A | CLPTM1::CBLC | 0.011 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.R5.A7ZE.01B | CMIP::BCMO1 | 0.41 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8077.01A | CMTM4::CMTM3 | 0.19 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.R5.A805.01A | CMTM4::TRIM40 | 0.6 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.A487.01A | CNOT1::PRRX2 | 0.37 | tier1 | Out-of-frame | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.FP.7998.01A | CNOT2::NUP107 | 0.051 | tier2 | In-frame | A0 : B1 | A0 : B0 | non-validated |
| STAD | TCGA.BR.4357.01A | COPG2::PODXL | 2.3 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.AA6D.01A | CORO1B::TMEM134 | 0.19 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8678.01A | CPSF1::ARHGAP39 | 0.018 | tier1 | Out-of-frame | A1 : B1 | A1 : B0 | NA |
| STAD | TCGA.BR.4357.01A | CRADD::MRPL42 | 0.045 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.D7.A6F0.01A | CRADD::MRPL42 | 0.045 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A92D.01A | CRB3::SAFB | 0.28 | tier2 | 5UTR-CDS | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.CG.4475.01A | CREBBP::GLYR1 | 0.42 | tier1 | Out-of-frame | A1 : B1 | A0 : B0 | NA |
| STAD | TCGA.VQ.AA6A.01A | CRKL::HPS4 | 0.85 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | CRLS1::CDS2 | 4.6 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A922.01A | CSMD2::DNAH14 | 0.046 | tier3 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4GP.01A | CSNK1A1::SCGB3A2 | 0.38 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8373.01A | CTCF::HSD11B2 | 0.92 | tier2 | 5UTR-CDS | A0 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.VQ.A8PH.01A | CTNNA1::REEP2 | 1.0 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.FP.8631.01A | CTPS::NFYC | 0.077 | tier4 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4438.01A | CUL7::RRP36 | 0.79 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7716.01A | DCTN1::C2orf65 | 0.033 | tier1 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8484.01A | DDX17::EIF2AK2 | 0.003 | tier3 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A94U.01A | DDX52::SSH2 | 0.17 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4444.01A | DDX58::PRSS3 | 0.16 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A452.01A | DEAF1::CHID1 | 0.09 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A92D.01A | DEAF1::PIDD | 0.93 | tier2 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A92D.01A | DENND1B::ATP6V1G3 | 0.58 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7716.01A | DEPDC1B::ERCC8 | 2.4 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.8526.01A | DGCR2::SLC25A1 | 0.08 | tier3 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4369.01A | DGKD::ATG16L1 | 0.76 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8E0.01A | DGKD::INPP5D | 1.1 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | DHX15::CCDC149 | 0.59 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8487.01A | DHX58::FAM134C | 0.35 | tier1 | In-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.A4QI.01A | DICER1::CLMN | 2.3 | tier2 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A91Q.01A | DLG1::MUSK | 0.17 | tier2 | Out-of-frame | A1 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.8060.01A | DLG1::PCSK5 | 1.7 | tier2 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.D7.A74A.01A | DNAH1::CACNA1D | 0.002 | tier3 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8060.01A | DNAJC14::SMARCC2 | 1.8 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | DNAJC3::CLDN10 | 0.15 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.AA6D.01A | DNAJC8::ZNF3 | 2.2 | tier1 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7716.01A | DNM2::ATG4D | 0.39 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.IN.A6RI.01A | DNM2::DAND5 | 0.028 | tier1 | Out-of-frame | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.IN.A6RI.01A | DNM2::NFIX | 0.095 | tier1 | Out-of-frame | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.IN.A6RI.01A | DNM2::RFX1 | 0.25 | tier1 | Out-of-frame | A1 : B1 | A1 : B0 | NA |
| STAD | TCGA.BR.8373.01A | DNM2::SLC44A2 | 0.057 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | validated |
| STAD | TCGA.R5.A7ZE.01B | DOT1L::PLEKHF1 | 0.13 | tier1 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4304.01A | DPY19L4::SDC2 | 0.019 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A91X.01A | DR1::CCDC18 | 0.56 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4475.01A | DRAM2::TTF2 | 4.7 | tier1 | In-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.8590.01A | DSTYK::NUCKS1 | 0.043 | tier1 | Out-of-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.8362.01A | DTL::INTS7 | 0.72 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | DTNB::ASXL2 | 0.79 | tier2 | Out-of-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.HU.A4GH.01A | DUS1L::ASPSCR1 | 0.52 | tier1 | Out-of-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.4366.01A | DYNLRB1::RALY | 1.1 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.FP.8631.01A | DZIP1L::TXNDC6 | 3.2 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7197.01A | EDEM2::PEX14 | 100.0 | tier1 | 5UTR-CDS | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.7901.01A | EDF1::DPP7 | 0.55 | tier1 | In-frame | A0 : B0 | A1 : B0 | NA |
| STAD | TCGA.BR.8589.01A | EEF2::DDX27 | 0.3 | tier4 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8679.01A | EEF2::EIF2AK2 | 3.9 | tier3 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8680.01A | EEF2::FAR1 | 0.65 | tier3 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4301.01A | EEF2::LIPF | 0.57 | tier3 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8590.01A | EFEMP2::C6orf132 | 5.5 | tier1 | In-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.VQ.A925.01A | EHBP1::COMMD1 | 2.0 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4366.01A | EIF2B1::ACSS3 | 0.035 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4HD.01A | EIF4G3::C7orf50 | 0.47 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4371.01A | ELAC1::MRO | 0.42 | tier3 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.D7.8576.01A | ELF1::DCLK1 | 0.88 | tier4 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8590.01A | ELF3::DDX21 | 0.24 | tier3 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.KB.A6F7.01A | ELP2::RPRD1A | 3.2 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8486.01A | ENO1::SIAE | 1.2 | tier3 | 3UTR-5UTR | A0 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.CD.A486.01A | EP300::TNRC6B | 0.003 | tier1 | Out-of-frame | A1 : B1 | A0 : B0 | NA |
| STAD | TCGA.HF.7132.01A | EPB41L1::C20orf152 | 0.17 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4304.01A | EPB41L1::NDRG3 | 0.073 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.FP.8631.01A | EPB41L1::PHF20 | 0.042 | tier4 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.AA6D.01A | EPHA2::FBXO42 | 0.88 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | EPS15L1::AKAP8 | 0.38 | tier1 | Out-of-frame | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.BR.A4PF.01A | EPS8::RERGL | 0.16 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4476.01A | ERC1::GABRB1 | 0.017 | tier4 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8E7.01B | ERRFI1::NCF2 | 3.4 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.AA6A.01A | ESCO1::ARHGAP28 | 0.077 | tier1 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.D7.8575.01A | ETNK1::ITPR2 | 0.24 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | ETV5::DGKG | 0.24 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | EXD2::RAD51B | 1.1 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4QI.01A | FAF1::EPS15 | 0.81 | tier2 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | FAM100B::ZNF710 | 0.91 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | FAM120A::C9orf89 | 0.53 | tier1 | Out-of-frame | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.HU.A4GH.01A | FAM120A::WNK2 | 0.4 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7959.01A | FAM134B::SLC6A19 | 2.1 | tier2 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.AA68.01A | FAM190A::SPARCL1 | 0.004 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4475.01A | FAM192A::CCDC102A | 0.87 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8060.01A | FAM193A::ZFYVE28 | 0.2 | tier4 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4366.01A | FAM59A::DSG4 | 0.91 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4HD.01A | FAM96A::CSNK1G1 | 3.9 | tier2 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8060.01A | FANCD2::MTMR14 | 1.6 | tier4 | Out-of-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.A4PF.01A | FAR2::NFE2 | 0.47 | tier2 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4443.01A | FARSA::LYL1 | 0.097 | tier1 | In-frame | A0 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.BR.8680.01A | FAT1::STAT6 | 2.1 | tier4 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8060.01A | FBXL20::GSDMB | 2.1 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | FBXW4::C10orf76 | 0.36 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.RD.A8N6.01A | FGD4::CACNA1C | 1.1 | tier4 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8080.01A | FGFR2::TACC2 | 0.13 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4443.01A | FHIT::STT3B | 0.86 | tier1 | 5UTR-CDS | A0 : B1 | A0 : B0 | validated |
| STAD | TCGA.CG.4466.01A | FKBP10::KRT40 | 2.1 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | FKBP11::PRKAG1 | 100.0 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.FP.A8CX.01A | FKTN::ULK4 | 1.2 | tier3 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A44T.01A | FLNA::EIF2AK2 | 0.25 | tier3 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.KB.A93J.01A | FLNB::RAD18 | 0.16 | tier3 | In-frame | A0 : B1 | A0 : B1 | NA |
| STAD | TCGA.R5.A7ZE.01B | FMNL2::KRT32 | 0.35 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8058.01A | FOXJ3::EIF4G3 | 0.34 | tier1 | 5UTR-CDS | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.8590.01A | FOXK2::RNF213 | 1.0 | tier1 | Out-of-frame | A1 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.8678.01A | FOXO1::WDFY2 | 4.0 | tier4 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8E2.01A | FOXRED2::IFT27 | 0.016 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A92D.01A | FRMD8::MARK2 | 0.63 | tier2 | Out-of-frame | A1 : B1 | A0 : B0 | NA |
| STAD | TCGA.CG.4475.01A | FRS2::PPP1R9A | 0.059 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4475.01A | FRS2::PTPRB | 0.065 | tier3 | 5UTR-CDS | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.CG.4476.01A | FRYL::FAM19A2 | 0.49 | tier3 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | FUK::PDPR | 1.1 | tier4 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8PQ.01A | FUT9::FBXO21 | 0.45 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | GALE::PITHD1 | 1.0 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4366.01A | GAS7::MYH1 | 0.15 | tier3 | In-frame | A1 : B1 | A0 : B0 | NA |
| STAD | TCGA.MX.A666.01A | GAS7::MYH1 | 0.15 | tier1 | In-frame | A1 : B1 | A0 : B0 | NA |
| STAD | TCGA.VQ.A91N.01A | GATA4::SFTPD | 0.54 | tier2 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.8243.01A | GATA6::DPF1 | 0.31 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | GDE1::FLYWCH2 | 0.37 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8373.01A | GDI2::IL2RA | 0.27 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | validated |
| STAD | TCGA.CG.4477.01A | GFPT1::NF1 | 0.32 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.AA6D.01A | GIGYF2::COG4 | 0.005 | tier1 | Out-of-frame | A0 : B1 | A0 : B1 | NA |
| STAD | TCGA.BR.4357.01A | GLG1::CFDP1 | 0.12 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | GMCL1::ANXA4 | 1.1 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.KB.A93J.01A | GNA13::TOM1 | 0.58 | tier1 | Out-of-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.A452.01A | GNB1::C1orf222 | 0.53 | tier4 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4QI.01A | GNG12::DIRAS3 | 0.088 | tier1 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4QI.01A | GOLGA4::MLH1 | 0.063 | tier4 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4HD.01A | GPATCH1::FCGRT | 2.7 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.B7.A5TN.01A | GPRC5A::NRG1 | 0.24 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | GRB7::CDK12 | 0.054 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.D7.8573.01A | GRB7::IKZF3 | 0.77 | tier2 | 5UTR-CDS | A0 : B0 | A0 : B1 | NA |
| STAD | TCGA.D7.8573.01A | GRB7::KRT27 | 0.003 | tier2 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | GRHL2::POLR2K | 0.64 | tier1 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.A4MH.01A | GRK6::DBN1 | 1.1 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8486.01A | GTPBP2::POLH | 1.3 | tier3 | In-frame | A0 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.BR.8060.01A | GUCY2C::ART4 | 2.4 | tier4 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.A486.01A | HBP1::SLC26A5 | 0.022 | tier2 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4J1.01A | HDAC1::EIF3I | 1.3 | tier1 | In-frame | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.VQ.A8PJ.01A | HDAC7::COL2A1 | 0.21 | tier2 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | HEG1::SLC12A8 | 0.008 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8E2.01A | HERC1::DAPK2 | 0.12 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8059.01A | HERC4::CCDC6 | 0.076 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.D7.A4YY.01A | HERC4::PBLD | 0.12 | tier2 | Out-of-frame | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.BR.8373.01A | HERC4::RUFY2 | 0.2 | tier3 | In-frame | A1 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.BR.8373.01A | HEXB::FAM169A | 0.12 | tier1 | In-frame | A0 : B0 | A0 : B0 | validated |
| STAD | TCGA.BR.4357.01A | HGS::BAIAP2 | 0.35 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4GH.01A | HIF1A::PRKCH | 0.5 | tier1 | Out-of-frame | A1 : B1 | A1 : B0 | NA |
| STAD | TCGA.CG.4449.01A | HIPK1::LRRC42 | 0.048 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8E2.01A | HIST1H2BD::MDN1 | 1.8 | tier1 | 3UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.AA6D.01A | HKDC1::SUPV3L1 | 0.33 | tier2 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | HMBOX1::ELP3 | 0.13 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.8610.01A | HNRNPA2B1::SIAE | 0.017 | tier3 | 3UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4QI.01A | HNRNPC::CHD8 | 4.6 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.FP.8631.01A | HNRNPH3::SLC29A3 | 0.65 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.FP.8099.01A | HOOK3::GTF2E2 | 0.19 | tier4 | In-frame | A1 : B1 | A0 : B0 | NA |
| STAD | TCGA.CD.A4MH.01A | HSD17B4::TNFAIP8 | 0.1 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4366.01A | HSPB11::SSBP3 | 100.0 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4HD.01A | HSPG2::MYBPHL | 0.7 | tier2 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4304.01A | IFT52::HCK | 0.14 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.8529.01A | IFT80::ILDR1 | 0.41 | tier1 | In-frame | A0 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.VQ.A8DU.01A | IGF2AS::QRSL1 | 0.022 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8373.01A | IKBKAP::EPB41L4B | 0.35 | tier1 | 5UTR-CDS | A0 : B1 | A0 : B0 | non-validated |
| STAD | TCGA.VQ.A92D.01A | IL1RAP::TPRG1 | 0.93 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4466.01A | IL27RA::RLN3 | 0.019 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8060.01A | ILF3::PDE4A | 0.3 | tier1 | 5UTR-CDS | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.D7.A4YU.01A | IMMP2L::DOCK4 | 0.12 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | INPP5D::GIGYF2 | 1.3 | tier1 | In-frame | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.CD.8533.01A | INSR::S1PR2 | 0.008 | tier1 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A928.01A | INTS4::NARS2 | 0.081 | tier2 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8678.01A | IP6K1::TRAIP | 0.092 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A925.01A | IP6K2::RHOA | 0.55 | tier1 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4443.01A | IPO11::KIF2A | 0.043 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.BR.8361.01A | IPPK::ZNF484 | 0.5 | tier3 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4477.01A | IQGAP1::CCDC63 | 1.8 | tier3 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8373.01A | IQGAP1::SEMA4B | 0.98 | tier1 | Out-of-frame | A1 : B0 | A1 : B0 | validated |
| STAD | TCGA.CG.4442.01A | IQGAP1::SEMA4B | 0.98 | tier3 | In-frame | A1 : B0 | A1 : B0 | non-validated |
| STAD | TCGA.CG.4449.01A | ITCH::RALY | 5.0 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7901.01A | ITGA6::HAT1 | 4.2 | tier4 | In-frame | A1 : B1 | A1 : B1 | NA |
| STAD | TCGA.BR.4357.01A | ITGB5::SLC12A8 | 0.16 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8373.01A | ITGB5::ZNF148 | 0.12 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | validated |
| STAD | TCGA.BR.8678.01A | ITPR2::RAD17 | 1.2 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.FP.8631.01A | ITPR3::SYNGAP1 | 0.59 | tier4 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4366.01A | JDP2::FAM164C | 0.097 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | JDP2::YLPM1 | 0.29 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8361.01A | KCMF1::DNAH6 | 5.6 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8060.01A | KCTD10::GLTP | 1.4 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A91N.01A | KCTD20::BRPF3 | 0.1 | tier1 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | KDM1A::EPHB2 | 0.14 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8DV.01A | KDM1A::TMEM115 | 0.83 | tier1 | Out-of-frame | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.BR.8289.01A | KDM2A::SYT12 | 0.3 | tier1 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8295.01A | KDM5A::NINJ2 | 0.011 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8590.01A | KIAA0182::CDH13 | 0.17 | tier1 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.FP.8631.01A | KIAA0195::TMEM104 | 0.92 | tier4 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.R5.A7ZE.01B | KIAA0232::LRCH3 | 0.59 | tier1 | Out-of-frame | A1 : B1 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8E0.01A | KIAA0232::MRFAP1 | 0.004 | tier4 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.IP.7968.01A | KIAA0528::IAPP | 0.32 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.A48C.01A | KIAA0528::SOX5 | 0.32 | tier2 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7959.01A | KIAA1033::HCAR1 | 0.75 | tier1 | CDS-3UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4443.01A | KIAA1797::DENND4C | 0.037 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.CG.4304.01A | KIAA1797::PSIP1 | 2.6 | tier2 | Out-of-frame | A0 : B1 | A0 : B1 | NA |
| STAD | TCGA.KB.A93J.01A | KIF21A::CCDC114 | 0.062 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.RD.A8N9.01A | KIF26A::C14orf2 | 1.4 | tier3 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8PH.01A | KLHL26::PGPEP1 | 0.23 | tier2 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7197.01A | KRT19::IKZF3 | 5.8 | tier4 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.IN.A7NU.01A | LAMA3::OSBPL1A | 1.6 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.FP.8631.01A | LAPTM4A::PUM2 | 0.38 | tier3 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8590.01A | LARP1B::SLC25A31 | 0.32 | tier4 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | LIMD1::LARS2 | 0.045 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8485.01A | LIPF::CLCN3 | 0.35 | tier3 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.8527.01A | LMTK3::DBP | 0.024 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | LONP1::DUS3L | 0.81 | tier3 | In-frame | A0 : B1 | A0 : B1 | NA |
| STAD | TCGA.BR.8486.01A | LRBA::PET112 | 0.25 | tier1 | In-frame | A1 : B0 | A0 : B0 | validated |
| STAD | TCGA.BR.4363.01A | LRRFIP2::EPHA3 | 0.23 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4QI.01A | LTBP1::YIPF4 | 1.6 | tier2 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4477.01A | LUC7L2::SLC25A13 | 0.3 | tier3 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7901.01A | LUC7L3::ABCC3 | 0.031 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A92D.01A | LUC7L3::CACNA1G | 0.57 | tier1 | In-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.8060.01A | LUZP1::IL28RA | 0.12 | tier4 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.F1.A72C.01A | MACF1::FOXJ3 | 0.37 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8590.01A | MAP4::SHISA5 | 0.75 | tier4 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4H4.01A | MAP4K4::SYF2 | 0.21 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8373.01A | MBNL2::HS6ST3 | 0.96 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | validated |
| STAD | TCGA.CG.4443.01A | MCF2L::LAMA5 | 0.22 | tier1 | In-frame | A1 : B1 | A0 : B0 | non-validated |
| STAD | TCGA.BR.8373.01A | ME1::SNAP91 | 2.0 | tier3 | Out-of-frame | A1 : B0 | A1 : B0 | validated |
| STAD | TCGA.BR.4191.01A | MECOM::ANKRD10 | 0.53 | tier3 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8DT.01A | MECOM::LRRC34 | 0.39 | tier2 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8486.01A | MED1::GRB7 | 1.6 | tier4 | CDS-5UTR | A1 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.VQ.A91S.01A | MED15::FKBP10 | 0.026 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7716.01A | MET::CAV1 | 0.18 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | METTL5::TLK1 | 0.023 | tier1 | In-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.HF.7132.01A | MFHAS1::ZFAT | 0.088 | tier4 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | MGAT4A::C2orf55 | 1.2 | tier2 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4466.01A | MGAT5::MBD5 | 0.017 | tier2 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8373.01A | MIB1::GREB1L | 2.1 | tier1 | Out-of-frame | A0 : B0 | A1 : B0 | non-validated |
| STAD | TCGA.BR.A4QI.01A | MIDN::HMHA1 | 0.014 | tier4 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.A486.01A | MINK1::SPNS3 | 0.34 | tier4 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.B7.A5TN.01A | MKL1::SLC25A17 | 1.3 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4363.01A | MLL3::GALNTL5 | 0.3 | tier3 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.8535.01A | MLL5::KIAA1267 | 0.38 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | MLL5::LHFPL3 | 0.79 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | MLL5::LHFPL3 | 0.79 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8373.01A | MLL5::LHFPL3 | 0.79 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.VQ.A925.01A | MLL5::LHFPL3 | 0.79 | tier2 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4477.01A | MLL5::PTPRZ1 | 0.17 | tier4 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | MLL5::RAPGEF1 | 1.7 | tier1 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8080.01A | MMP15::CCDC135 | 0.011 | tier4 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7959.01A | MRPL32::C7orf72 | 100.0 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | MRPL37::MASP2 | 0.13 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.IP.7968.01A | MRPS35::LYRM5 | 0.076 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.8533.01A | MSH2::EPCAM | 0.77 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.IN.8462.01A | MTHFS::ACAN | 3.4 | tier2 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4GF.01A | MTUS1::ASAH1 | 0.048 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8687.01A | MUC13::SIAE | 0.57 | tier3 | 3UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.8525.01A | MYEOV::FAM38A | 0.053 | tier3 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8687.01A | MYL6::STAT6 | 0.059 | tier2 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | MYO1D::ACCN1 | 0.64 | tier2 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4444.01A | MYO1E::GPR176 | 0.062 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.FP.8631.01A | NADK::TOM1L2 | 1.1 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A925.01A | NAGS::PYY | 100.0 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.RD.A8N1.01A | NAP1L4::CARS | 0.86 | tier1 | Out-of-frame | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.BR.7901.01A | NBEAL2::ATP2A3 | 0.01 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A925.01A | NCK2::MRPS9 | 0.012 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.AA6D.01A | NCOA6::GGT7 | 0.25 | tier2 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | NCOR2::DHX37 | 0.033 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.A4MH.01A | NCOR2::SCARB1 | 0.08 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A91Y.01A | NCOR2::SCARB1 | 0.08 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8PD.01A | NEDD4L::ALPK2 | 0.052 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8059.01A | NET1::TUBAL3 | 0.22 | tier3 | Out-of-frame | A1 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | NF1::ATAD5 | 0.019 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4440.01A | NF1::ATAD5 | 0.019 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4477.01A | NF1::GFPT1 | 0.32 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8PM.01A | NFE2L2::VMP1 | 0.77 | tier4 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.IN.A6RI.01A | NFIX::RFX1 | 0.89 | tier1 | In-frame | A1 : B1 | A0 : B0 | NA |
| STAD | TCGA.FP.8631.01A | NFIX::VDR | 0.08 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.RD.A8MW.01A | NFYA::AKT2 | 2.5 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8DZ.01A | NIPAL2::RGS22 | 0.005 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8678.01A | NKD1::ADCY7 | 1.0 | tier1 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | NLK::KSR1 | 0.92 | tier2 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8590.01A | NOL10::ROCK2 | 0.99 | tier3 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4460.01A | NOS1AP::PBX1 | 4.6 | tier1 | Out-of-frame | A1 : B1 | A0 : B0 | NA |
| STAD | TCGA.VQ.A91N.01A | NPHP4::ACOT7 | 0.12 | tier2 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A91S.01A | NPHP4::FAM71B | 1.6 | tier2 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7959.01A | NPSR1::C7orf10 | 1.2 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7959.01A | NT5DC3::KNTC1 | 0.51 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.D7.8575.01A | NUDT17::POLR3C | 1.2 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.R5.A7ZE.01B | NUMA1::CLPB | 0.07 | tier2 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8485.01A | NUMB::HEATR4 | 2.3 | tier2 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.D7.8579.01A | NUP153::ZNF280D | 0.89 | tier1 | CDS-5UTR | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.BR.8077.01A | NUPL2::DFNA5 | 0.63 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.A48C.01A | NXT2::COL4A5 | 0.62 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A925.01A | OBFC1::COL17A1 | 0.082 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.8525.01A | OLFM2::EIF3G | 0.26 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7197.01A | OLFM2::PSENEN | 0.15 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.8535.01A | OSBPL5::MRGPRE | 0.016 | tier1 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8590.01A | OTX1::EHBP1 | 0.53 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8590.01A | PACS1::FAM32A | 2.7 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8295.01A | PACSIN2::LGALS1 | 0.77 | tier3 | Out-of-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.CD.8532.01A | PACSIN2::TTLL12 | 1.4 | tier4 | In-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.HU.A4HD.01A | PADI2::EXD3 | 0.01 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.RD.A8N4.01A | PAK1::C11orf67 | 0.091 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8365.01A | PARD3::COLQ | 0.67 | tier3 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.8533.01A | PARD3B::PTH2R | 0.23 | tier2 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7716.01A | PARD3B::SLC50A1 | 0.11 | tier4 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8484.01A | PCGF3::HTT | 2.7 | tier1 | In-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.RD.A7BT.01A | PCSK5::DDX58 | 1.6 | tier3 | In-frame | A1 : B0 | A0 : B1 | NA |
| STAD | TCGA.MX.A666.01A | PDCD2L::CACNA1A | 1.2 | tier2 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A92D.01A | PDE4D::ERCC8 | 0.054 | tier2 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | PDHX::CAT | 0.71 | tier1 | Out-of-frame | A1 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.8483.01A | PGAP3::TOP2A | 0.56 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | PGM2L1::CHRDL2 | 6.9 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.KB.A6F7.01A | PHF17::LARP1B | 1.0 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | PHF21A::AMBRA1 | 0.11 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4443.01A | PIK3R4::ASTE1 | 1.7 | tier1 | In-frame | A0 : B0 | A0 : B0 | validated |
| STAD | TCGA.FP.8631.01A | PILRB::AP4M1 | 0.24 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4QI.01A | PIP4K2B::CWC25 | 1.7 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.FP.8631.01A | PITPNA::LLGL2 | 0.46 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A452.01A | PKIG::C2orf53 | 1.3 | tier2 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8PH.01A | PLCG1::EYA2 | 0.53 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.AA6B.01A | PLD1::SLC7A14 | 0.025 | tier1 | In-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.7901.01A | PLEK2::TMEM229B | 0.22 | tier3 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4PF.01A | PLEKHA5::RERGL | 0.075 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8060.01A | PLEKHF1::C19orf12 | 0.79 | tier2 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8373.01A | PLEKHH1::MPP5 | 4.5 | tier2 | Out-of-frame | A1 : B1 | A0 : B0 | validated |
| STAD | TCGA.BR.4357.01A | PLEKHH1::ZFYVE26 | 0.19 | tier2 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8361.01A | PLXNA3::ATP6AP1 | 0.14 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8590.01A | PMF1::SYT11 | 0.69 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A928.01A | PMPCB::WWOX | 100.0 | tier3 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8485.01A | PNPLA2::EPS8L2 | 0.081 | tier1 | In-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | POLDIP3::ARFGAP3 | 0.1 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8485.01A | PPARGC1B::IL17B | 0.26 | tier2 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A91Y.01A | PPFIA1::ANO1 | 0.9 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.AA6G.01A | PPFIA1::ANO1 | 0.9 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4GC.01A | PPFIBP1::ADIPOR2 | 0.87 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8687.01A | PPM1B::ABCG8 | 1.3 | tier4 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8687.01A | PPM1B::IQCA1 | 0.037 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.A489.01A | PPP1CB::PLB1 | 0.89 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8080.01A | PPP2R4::CRAT | 0.28 | tier4 | Out-of-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.IN.AB1X.01A | PPP2R5C::FOXN3 | 0.36 | tier1 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7716.01A | PPP3CC::PIWIL2 | 1.4 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.D7.A6F0.01A | PPP6R3::RHOD | 0.017 | tier1 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4366.01A | PQLC1::PARD6G | 0.1 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A925.01A | PRKCA::CEP112 | 0.2 | tier2 | In-frame | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.HU.A4HD.01A | PRKD2::MYH14 | 0.073 | tier1 | In-frame | A0 : B1 | A0 : B1 | NA |
| STAD | TCGA.BR.8687.01A | PRPF6::RP11-366L20.2 | 1.7 | tier4 | Out-of-frame | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.BR.8687.01A | PRPF6::STAT6 | 0.44 | tier3 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8286.01A | PRR15L::CBX1 | 0.12 | tier2 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A928.01A | PSMD1::AC112715.2 | 100.0 | tier1 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.AA6D.01A | PTGES2::CIZ1 | 0.006 | tier2 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4443.01A | PTK2::DENND3 | 0.08 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.D7.A6EZ.01A | PTPN1::PRR11 | 3.2 | tier2 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4GH.01A | PTPN12::AC007000.1 | 0.4 | tier2 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | PTPN23::RTP3 | 0.25 | tier1 | Out-of-frame | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.CG.4475.01A | PTPN4::AC069154.2 | 0.35 | tier2 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8690.01A | PTPRH::PPP6R1 | 0.012 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | validated |
| STAD | TCGA.VQ.AA68.01A | PTPRK::RSPO3 | 0.049 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.D7.8579.01A | PTPRN2::IMMP2L | 0.89 | tier3 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.D7.8576.01A | PTPRZ1::MDFIC | 0.38 | tier2 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.A4MH.01A | PXN::COQ5 | 0.78 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4PE.01A | R3HCC1::ENTPD4 | 1.3 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | RAB1A::C7orf50 | 0.64 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4361.01A | RAB6A::HIST1H2AC | 0.63 | tier1 | CDS-3UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4438.01A | RACGAP1::LIMA1 | 0.13 | tier1 | Out-of-frame | A0 : B0 | A1 : B0 | NA |
| STAD | TCGA.IP.7968.01A | RAD51B::GPHN | 0.11 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8PH.01A | RALY::CHMP4B | 0.009 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.8532.01A | RAP1A::ABCD3 | 0.18 | tier2 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.FP.8631.01A | RAP1B::CSAD | 2.4 | tier2 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7716.01A | RAPGEF1::WDR83 | 0.099 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.RD.A7BT.01A | RARA::C17orf108 | 0.19 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.FP.A8CX.01A | RAVER1::C19orf6 | 0.028 | tier3 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A91N.01A | RBM6::RNF123 | 0.62 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | RDH13::NLRP9 | 0.37 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8678.01A | RECQL5::UNC13D | 0.17 | tier1 | In-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.8679.01A | RER1::DDX21 | 0.82 | tier3 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.RD.A8MW.01A | RERE::TPM3 | 0.9 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4306.01A | RFC4::EHHADH | 0.69 | tier2 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4H5.01A | RFWD2::LRRC52 | 1.8 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.A4MH.01A | RHPN2::PEPD | 0.94 | tier1 | In-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.VQ.A922.01A | RNF19A::ANKRD46 | 1.8 | tier2 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8677.01A | ROCK1::ANKRD29 | 0.8 | tier2 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4301.01A | ROCK1::LAMA3 | 0.72 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4GU.01A | ROCK2::ASAP2 | 0.48 | tier2 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4QI.01A | RP11-407N17.3::MIPOL1 | 0.092 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.IN.A6RN.01A | RP11-428C6.1::BTF3 | 0.08 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.IP.7968.01A | RPL19::CACNB1 | 0.087 | tier1 | Out-of-frame | A1 : B1 | A1 : B0 | NA |
| STAD | TCGA.BR.A452.01A | RPL22::ACOT7 | 0.62 | tier3 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8591.01A | RPL8::DDX21 | 0.6 | tier3 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8PH.01A | RPP14::FLNB | 0.094 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4J1.01A | RPS19::CEACAM3 | 0.53 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.8527.01A | RPS6KA3::BMX | 0.73 | tier1 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.IP.7968.01A | RPS6KB1::VMP1 | 1.4 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8590.01A | RRBP1::OVOL2 | 0.9 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4443.01A | RRBP1::SNX5 | 0.12 | tier1 | 5UTR-CDS | A0 : B1 | A0 : B0 | validated |
| STAD | TCGA.CG.4477.01A | RSPRY1::OGFOD1 | 0.39 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8373.01A | RTN3::SLC22A9 | 0.12 | tier2 | Out-of-frame | A1 : B0 | A0 : B0 | validated |
| STAD | TCGA.CG.4449.01A | RTN3::SLC22A9 | 0.12 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | SAE1::ARHGAP35 | 2.8 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8PQ.01A | SAFB2::SCAF1 | 0.51 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4301.01A | SAMD12::COL14A1 | 2.0 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4443.01A | SAMHD1::HCK | 1.3 | tier1 | CDS-5UTR | A1 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.BR.A4QI.01A | SBNO2::C19orf26 | 0.003 | tier3 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | SCLY::RAMP1 | 0.29 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8297.01A | SCYL3::KIFAP3 | 1.8 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.HF.A5NB.01A | SDC1::PUM2 | 2.5 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4HD.01A | SDC4::TP53TG5 | 1.2 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | SEC14L1::MGAT5B | 0.84 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.RD.A8MW.01A | SEC63::PCBP2 | 0.7 | tier3 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A925.01A | SEL1L3::CCKAR | 0.023 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.D7.A4YU.01A | SEMA3B::ALS2CR12 | 2.5 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.AA6D.01A | SEMA4B::CIB2 | 0.062 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7901.01A | SEMA4B::ZNF710 | 0.18 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4477.01A | SERPINH1::ZBTB44 | 1.1 | tier1 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4CR.01A | SETD2::SCAP | 0.009 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | SETD2::SMARCC1 | 0.16 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.R5.A7ZE.01B | SFMBT1::TKT | 0.011 | tier1 | 5UTR-CDS | A0 : B1 | A0 : B1 | NA |
| STAD | TCGA.VQ.A91K.01A | SGPL1::ADAMTS14 | 1.1 | tier4 | In-frame | A0 : B0 | A1 : B0 | NA |
| STAD | TCGA.BR.4366.01A | SH3D21::EIF2C3 | 0.33 | tier3 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4369.01A | SH3D21::PCGF3 | 0.51 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A925.01A | SH3PXD2A::OBFC1 | 0.047 | tier1 | Out-of-frame | A0 : B0 | A0 : B1 | NA |
| STAD | TCGA.BR.A4QI.01A | SHB::LYN | 1.0 | tier3 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.A4MH.01A | SIPA1L3::EIF3B | 0.071 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4443.01A | SIPA1L3::PTOV1 | 0.044 | tier1 | Out-of-frame | A0 : B1 | A0 : B0 | non-validated |
| STAD | TCGA.VQ.AA6B.01A | SKIL::TNIK | 0.086 | tier2 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.R5.A7ZF.01A | SKP1::PMPCA | 1.8 | tier3 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8590.01A | SLC12A2::MEGF10 | 1.9 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | SLC12A7::TERT | 0.76 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | SLC22A23::C6orf145 | 1.8 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4477.01A | SLC25A13::C7orf55 | 0.48 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4477.01A | SLC25A13::LUC7L2 | 0.3 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.MX.A663.01A | SLC38A10::C17orf101 | 0.69 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8060.01A | SLC38A10::NPLOC4 | 0.83 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | SLC39A14::PIWIL2 | 0.24 | tier1 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.KB.A93J.01A | SLC4A4::EPB41L1 | 0.66 | tier1 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8382.01A | SLC5A1::YWHAH | 0.34 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.AA6D.01A | SLC5A1::YWHAH | 0.34 | tier2 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.FP.8631.01A | SLC9A8::PTGIS | 0.003 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.A486.01A | SMAD3::IL17RA | 1.9 | tier2 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | SMAD3::SMAD6 | 0.18 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | SMARCA4::C19orf38 | 0.064 | tier1 | Out-of-frame | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.VQ.A91K.01A | SMARCA4::CARM1 | 2.1 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4QI.01A | SMEK1::FBLN5 | 0.35 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8373.01A | SMG5::PMF1 | 0.049 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | validated |
| STAD | TCGA.BR.8484.01A | SMURF1::CDK14 | 1.1 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4462.01A | SMYD4::SERPINF1 | 2.9 | tier1 | In-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.HU.A4GF.01A | SNRNP40::MAP2K5 | 0.13 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4GF.01A | SNRNP40::SPOCD1 | 0.78 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4443.01A | SNTB2::TMCO7 | 1.7 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.FP.8631.01A | SNX9::ZDHHC14 | 3.9 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | SON::IL10RB | 2.1 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4443.01A | SORBS3::XPO7 | 0.049 | tier2 | Out-of-frame | A1 : B1 | A0 : B0 | non-validated |
| STAD | TCGA.BR.4366.01A | SORD::TRIM69 | 2.1 | tier1 | Out-of-frame | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.VQ.A91S.01A | SOX6::C20orf24 | 0.029 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4PD.01A | SP3::SCRN3 | 0.056 | tier2 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4443.01A | SPAG9::MBTD1 | 0.011 | tier1 | In-frame | A1 : B0 | A0 : B0 | validated |
| STAD | TCGA.BR.4367.01A | SPATS2::SENP1 | 0.048 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | SPECC1L::CABIN1 | 0.51 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8678.01A | SPECC1L::SMARCB1 | 0.12 | tier1 | 5UTR-CDS | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.IN.A6RN.01A | SPTAN1::FPGS | 0.19 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4H2.01A | SPTAN1::GLE1 | 0.077 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A922.01A | SPTBN1::SPAG5 | 1.3 | tier4 | In-frame | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.IN.AB1X.01A | SPTLC2::DIAPH3 | 0.033 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4443.01A | SPTLC2::SNW1 | 2.2 | tier2 | Out-of-frame | A0 : B1 | A0 : B0 | non-validated |
| STAD | TCGA.BR.7959.01A | SRGAP1::KNTC1 | 0.64 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A925.01A | SRPK1::CCND3 | 1.4 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | SRSF4::MECR | 0.71 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4366.01A | SRSF9::RFX4 | 0.59 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A925.01A | SSH2::SLC6A4 | 2.1 | tier1 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8687.01A | SSR2::SUPT16H | 0.18 | tier3 | 3UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A91S.01A | STARD3::JUP | 0.029 | tier1 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8PH.01A | STAU1::MAP1LC3A | 2.4 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4443.01A | STK16::PLCD4 | 0.027 | tier1 | In-frame | A0 : B0 | A0 : B0 | validated |
| STAD | TCGA.BR.8297.01A | STK24::DOCK9 | 0.008 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.AA6D.01A | STK24::DOCK9 | 0.008 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A928.01A | STK24::SLC15A1 | 0.35 | tier4 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.IP.7968.01A | STK38L::CCDC91 | 0.49 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.8535.01A | STRBP::DENND1A | 0.092 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4H2.01A | STRN4::UBE2S | 0.011 | tier2 | In-frame | A0 : B0 | A0 : B1 | NA |
| STAD | TCGA.RD.A8MW.01A | SULF2::DEXI | 0.078 | tier1 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4201.01A | SYF2::USP48 | 0.063 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8590.01A | TACC2::PPAPDC1A | 0.15 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8686.01A | TACC2::PPAPDC1A | 0.15 | tier3 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8368.01A | TACC2::ZNF365 | 0.41 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8483.01A | TADA2A::NT5C3L | 0.11 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | TAF13::SORT1 | 2.4 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.IN.A6RI.01A | TAF3::ATP5C1 | 0.2 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8DV.01A | TAF6L::SCGB1A1 | 100.0 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4QI.01A | TAOK1::PROCA1 | 0.26 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4366.01A | TARBP1::CACHD1 | 0.08 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4366.01A | TBC1D22A::GTSE1 | 1.5 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.RD.A8MW.01A | TBC1D8::RNF149 | 4.0 | tier4 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7901.01A | TBL1XR1::ROCK1 | 0.16 | tier1 | 5UTR-CDS | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.KB.A93J.01A | TBXAS1::TOMM7 | 100.0 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | TC2N::TRIP11 | 0.15 | tier3 | Out-of-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.CG.4304.01A | TCF12::RGMA | 0.2 | tier2 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7197.01A | TCF3::DNAJC11 | 0.043 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8060.01A | TEAD2::NOSIP | 1.1 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8485.01A | TEAD4::CD82 | 0.48 | tier3 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A452.01A | TESC::FBXO21 | 0.17 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4HD.01A | TEX2::STARD3 | 0.51 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8590.01A | TFEB::EPS15L1 | 0.98 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.8525.01A | TFEB::PGC | 1.5 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A92D.01A | TFEB::SUPT3H | 2.7 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8687.01A | TFF1::DDX21 | 100.0 | tier4 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | THRA::CDK12 | 0.41 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4444.01A | THSD4::ADAM10 | 0.039 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4HD.01A | TIRAP::FOXRED1 | 1.9 | tier3 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.8527.01A | TMEM123::MMP20 | 0.87 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8060.01A | TMEM132B::PPAPDC1A | 2.1 | tier4 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8PU.01A | TMEM179B::RSF1 | 0.35 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A91K.01A | TMEM180::GBF1 | 0.19 | tier2 | In-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.VQ.A925.01A | TMEM182::IL18R1 | 0.49 | tier2 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8679.01A | TMEM50B::TLX2 | 100.0 | tier3 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A91K.01A | TMEM59::SSBP3 | 100.0 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4366.01A | TMEM63B::RSPH9 | 0.087 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | TMEM87B::IL1RN | 0.1 | tier2 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4466.01A | TMEM99::KRT28 | 0.043 | tier4 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7959.01A | TMPO::RP11-977G19.10 | 0.14 | tier1 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8DZ.01A | TMPRSS2::SETD4 | 0.49 | tier2 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.F1.6875.01A | TNPO2::HOOK2 | 0.14 | tier4 | 5UTR-CDS | A0 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.CD.8524.01A | TNRC18::RNF216 | 0.17 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4477.01A | TOM1L2::NXN | 0.26 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7716.01A | TOMM20::EPHB2 | 0.046 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8485.01A | TPD52::ZNF704 | 0.48 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7959.01A | TPPP::FAM134B | 0.6 | tier1 | In-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.BR.8485.01A | TPT1::DDX27 | 1.2 | tier4 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8679.01A | TPT1::EIF2AK2 | 0.009 | tier3 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8077.01A | TPX2::ACLY | 1.9 | tier1 | 5UTR-CDS | A0 : B1 | A0 : B1 | NA |
| STAD | TCGA.VQ.A8PM.01A | TRAF3::WDR20 | 0.97 | tier2 | In-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.HF.7132.01A | TRAPPC9::AC068353.1 | 0.064 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | TRAPPC9::EIF2C2 | 0.004 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A91N.01A | TRIM35::PEBP4 | 1.6 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8590.01A | TRIM37::DNAH17 | 0.052 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A925.01A | TRIM4::ZCWPW1 | 3.4 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7959.01A | TRIP13::ANKRD33B | 0.55 | tier2 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.RD.A8MW.01A | TRMU::ATXN10 | 0.066 | tier1 | Out-of-frame | A0 : B1 | A0 : B1 | NA |
| STAD | TCGA.BR.4363.01A | TRMU::PPARA | 0.057 | tier1 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8484.01A | TRRAP::ANKIB1 | 0.23 | tier1 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.D7.A6EZ.01A | TSPAN14::IFIT1 | 0.56 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.8526.01A | TTC39C::NPC1 | 0.89 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | TTLL12::USP39 | 0.075 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.IN.A6RS.01A | TTLL5::EIF2B2 | 3.1 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.D7.A6EV.01A | TUBB6::OSBPL1A | 1.1 | tier2 | Out-of-frame | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.CG.4443.01A | TYW1::TRA2A | 0.76 | tier1 | In-frame | A0 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.FP.8631.01A | UBE2R2::ACO1 | 0.52 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.KB.A93J.01A | UBE3B::GNS | 0.3 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A92D.01A | UCK2::PBX1 | 1.1 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7704.01A | ULK1::SFSWAP | 0.3 | tier2 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8060.01A | URM1::TP53BP1 | 0.69 | tier1 | In-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | USP10::CDH13 | 0.27 | tier1 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | USP12::LNX2 | 2.6 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8060.01A | USP34::CCT4 | 1.0 | tier1 | In-frame | A0 : B1 | A0 : B1 | NA |
| STAD | TCGA.D7.8578.01A | USP43::C1orf168 | 0.45 | tier4 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8PK.01A | USP54::AP3M1 | 0.8 | tier2 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | USP6NL::UPF2 | 0.27 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | USP6NL::UPF2 | 0.27 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.RD.A8N4.01A | UVRAG::CMPK1 | 0.12 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.RD.A8N4.01A | UVRAG::MAP6 | 0.64 | tier1 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4366.01A | UVRAG::PACRG | 0.24 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A92D.01A | VGLL4::IQSEC1 | 0.96 | tier2 | Out-of-frame | A1 : B1 | A0 : B0 | NA |
| STAD | TCGA.VQ.A925.01A | VGLL4::TMEM40 | 0.007 | tier2 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8682.01A | VIM::STAT6 | 0.3 | tier3 | NA | A0 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.D7.8579.01A | VMP1::TBX4 | 3.2 | tier3 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.B7.A5TN.01A | VPS13B::OSR2 | 0.92 | tier3 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A8DZ.01A | VPS13B::RGS22 | 2.2 | tier3 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.FP.8631.01A | VPS13C::HERC1 | 0.6 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.FP.8631.01A | VPS13D::MFN2 | 0.76 | tier3 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8678.01A | VPS54::PELI1 | 1.7 | tier1 | CDS-5UTR | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | VPS8::EHHADH | 0.69 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | VPS8::EIF2AK4 | 0.28 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.IN.A6RN.01A | VPS8::EPHB3 | 0.22 | tier3 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4477.01A | VPS8::GLYR1 | 0.68 | tier1 | 5UTR-CDS | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.VQ.A91K.01A | VSIG1::MID2 | 0.095 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.IN.AB1X.01A | WARS::EPB41L4B | 0.64 | tier1 | Out-of-frame | A1 : B0 | A1 : B0 | NA |
| STAD | TCGA.BR.8678.01A | WDFY2::FOXO1 | 1.1 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7716.01A | WDR20::DYNC1H1 | 0.45 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A928.01A | WDR45L::RAB40B | 0.16 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | WIPF2::PSMD3 | 0.57 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.D7.8573.01A | WIPF2::THRA | 0.11 | tier4 | 5UTR-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | WWC3::SHROOM2 | 0.15 | tier1 | In-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.CD.8535.01A | WWOX::VAT1L | 0.64 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8373.01A | WWP2::NFAT5 | 2.3 | tier1 | Out-of-frame | A0 : B1 | A0 : B0 | non-validated |
| STAD | TCGA.VQ.AA6J.01A | XKR6::HOOK3 | 0.009 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4477.01A | XPO4::SSRP1 | 0.28 | tier4 | In-frame | A0 : B1 | A0 : B1 | NA |
| STAD | TCGA.BR.4357.01A | XPO4::ZDHHC20 | 0.19 | tier4 | In-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8678.01A | XXbac-BPG246D15.9::DAXX | 0.25 | tier1 | NA | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4366.01A | XYLB::DLEC1 | 0.84 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4QI.01A | XYLT1::QPRT | 0.25 | tier3 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.A4QI.01A | XYLT1::SPN | 1.0 | tier4 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | YEATS4::LYZ | 0.27 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | ZBTB17::MTOR | 0.86 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.HU.A4H8.01A | ZBTB2::AKAP12 | 0.27 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CD.A487.01A | ZBTB8OS::SYNC | 2.4 | tier3 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.MX.A666.01A | ZC3H3::C8orf73 | 0.12 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.RD.A8MW.01A | ZC3H7A::SYT13 | 2.5 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.AA68.01A | ZDHHC20::SPATA13 | 0.16 | tier2 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | ZDHHC6::TCF7L2 | 1.1 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7197.01A | ZFAND2B::CYP27A1 | 2.0 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4357.01A | ZFAND3::MDGA1 | 0.37 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.RD.A8MW.01A | ZFP64::CSE1L | 0.41 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | ZFYVE16::BDP1 | 0.22 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7716.01A | ZMYND11::PCDH15 | 0.12 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4443.01A | ZNF217::BCAS1 | 1.3 | tier1 | 5UTR-5UTR | A0 : B0 | A0 : B0 | non-validated |
| STAD | TCGA.BR.A4QI.01A | ZNF416::C19orf18 | 100.0 | tier1 | Out-of-frame | A1 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | ZNF507::LPHN1 | 7.5 | tier2 | CDS-5UTR | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.7901.01A | ZNF585B::MYRIP | 0.15 | tier2 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.VQ.A92D.01A | ZNF638::ANTXR1 | 1.4 | tier2 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.8289.01A | ZNF681::IMMP2L | 0.1 | tier1 | Out-of-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4369.01A | ZNF695::SMYD3 | 0.64 | tier1 | In-frame | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.CG.4449.01A | ZNF799::EPS15L1 | 1.1 | tier1 | In-frame | A0 : B1 | A0 : B0 | NA |
| STAD | TCGA.VQ.A922.01A | ZNF828::COL4A2 | 0.85 | tier4 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |
| STAD | TCGA.BR.4255.01A | ZZZ3::CDH1 | 0.22 | tier1 | 5UTR-CDS | A0 : B0 | A0 : B0 | NA |